DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006438
GeneE330009J07Rik
Synonyms
Desc.RIKEN cDNA E330009J07 gene
LocusNM_175528 chr6:40357497-40386132(-)
DB links


Entrez 243780
MGI 2444256
Ensembl ENSMUSG00000037172
Vega OTTMUSG00000022837
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006369
(v2.0)
E330009J07RikNM_175528243780
7.701129.98945.127929.849411.49990.1698011.0996374.108211.53470.141716
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006438
(v1.0)
E330009J07Rik243780
Minor ZGA0.93814
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006369
(v2.0)
E330009J07Rik243780
741/527-0.0211490/527-0.2208101/5271.199380/5270.8564343/5271.4311757/5271.1364
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006369
(v2.0)
E330009J07Rik243780
373/1960.4137250/1960.233890/1962.4075315/1962.002198/1962.0494950/1961.6727
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006369
(v2.0)
E330009J07Rik243780
81.228115552.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006369
(v2.0)
E330009J07Rik243780
13.82828416.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006438
(v1.0)
E330009J07RikNM_175528243780
31.175631.286122.22997.960330.762499
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006438
(v1.0)
E330009J07RikFR113951,NM_175528243780
98.838293.673969.562223.06672.00079
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006438
(v1.0)
E330009J07RikNM_175528243780
32.5972.8163734.1338
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006438
(v1.0)
E330009J07RikNM_175528243780
31.817930.97255.146
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006438
(v1.0)
E330009J07RikFR113951,NM_175528243780
95.1283123.377
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006438
(v1.0)
E330009J07RikNM_175528243780
32.61592.777860.4823
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006438
(v1.0)
E330009J07RikNM_175528243780
20.58157.686017.97755
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006438
(v1.0)
E330009J07RikFR113951,NM_175528243780
23.296827.0329
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006438
(v1.0)
E330009J07RikNM_175528243780
6.85.0774
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006438
(v1.0)
E330009J07RikNM_175528243780
0.179630.0308947
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006438
(v1.0)
1449056_atMm.333006E330009J07RikNM_175528.4243780
934.251636.6943.125117.22543.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006438
(v1.0)
A_51_P229875E330009J07RikAK122457243780
11P0.7510.213P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0006438
(v1.0)
E330009J07Rik243780
1.5201.520