DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006452
GeneE430025E21Rik
Synonymsstrumpellin
Desc.RIKEN cDNA E430025E21 gene
LocusNM_153548 chr15:59163552-59205707(-)
DB links


Entrez 223593
MGI 2146110
Ensembl ENSMUSG00000022350
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006383
(v2.0)
E430025E21RikNM_153548223593
22.089121.113118.913135.809237.27686.8605467.253816.302936.79387.21625
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006452
(v1.0)
E430025E21Rik223593
Major ZGA0.99709
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006383
(v2.0)
E430025E21Rik223593
598/459-0.1309406/459-0.2925133/4591.7872270/4590.563215/459-2.797670/459-3.2847
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006383
(v2.0)
E430025E21Rik223593
243/174-0.0308182/174-0.0511125/1743.0381248/1741.82767/174-2.419325/174-3.3218
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006383
(v2.0)
E430025E21Rik223593
73.113213354.97
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006383
(v2.0)
E430025E21Rik223593
15.33157321
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006452
(v1.0)
E430025E21RikNM_153548223593
21.944213.063526.645325.855447.4792
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006452
(v1.0)
E430025E21RikNM_153548223593
174.83377.0295137.132164.207291.792
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006452
(v1.0)
E430025E21RikNM_153548223593
22.94478.0782214.2525
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006452
(v1.0)
E430025E21RikNM_153548223593
22.396312.932312.0571
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006452
(v1.0)
E430025E21RikNM_153548223593
151.92697.1736
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006452
(v1.0)
E430025E21RikNM_153548223593
22.9587.9675813.2238
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006452
(v1.0)
E430025E21RikNM_153548223593
24.669424.964425.3944
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006452
(v1.0)
E430025E21RikNM_153548223593
256.713254.922
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006452
(v1.0)
E430025E21RikNM_153548223593
9.6478533.6351
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006452
(v1.0)
E430025E21RikNM_153548223593
1.426891.24594
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006452
(v1.0)
1292C0192H04-3Mm.35481AL022848223593
U036211NAP110947-1AL022848;TC837155U,F,23.3133.46383.09393.68713.43953.64153.6711
0006452
(v1.0)
4032C0912D08-3Mm.35481AL022848223593
U036211NAP121748-001AL022848;TC837156U,F,22.63812.87123.00963.02382.67642.95122.6694
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006452
(v1.0)
1434132_atMm.218665E430025E21RikNM_153548.2223593
2173.85913.3252205.952656.653667.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006452
(v1.0)
A_51_P371856E430025E21RikNM_153548223593
11P0.6490.15P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0006452
(v1.0)
E430025E21Rik223593
110110