DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006509
GeneEdf1
Synonymshypothetical protein 1-9
Desc.endothelial differentiation-related factor 1
LocusNM_021519 chr2:25413420-25417602(+)
DB links


Entrez 59022
MGI 1891227
Ensembl ENSMUSG00000015092
Vega OTTMUSG00000012162
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006438
(v2.0)
Edf1NM_02151959022
290.39427.88534.60267109.018147.816140.23974.91095.06831143.578165.46
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006509
(v1.0)
Edf159022
Major ZGA0.97449
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006438
(v2.0)
Edf159022
728/4810.0849397/481-0.3922102/4811.3417191/481-0.001215/481-2.8645161/481-2.1678
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006438
(v2.0)
Edf159022
324/2000.1823193/200-0.166799/2002.5161174/2001.12064/200-3.293958/200-2.3552
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006438
(v2.0)
Edf159022
94.217317055.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006438
(v2.0)
Edf159022
17.16678919.29
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006509
(v1.0)
Edf1NM_02151959022
28.99283.2100681.107102.65953.5006
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006509
(v1.0)
Edf1NM_02151959022
33.27142.2972799.2829125.80252.3624
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006509
(v1.0)
Edf1NM_02151959022
30.3146106.23.50225
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006509
(v1.0)
Edf1NM_02151959022
29.59013.177833.78443
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006509
(v1.0)
Edf1NM_02151959022
2.331922.84047
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006509
(v1.0)
Edf1NM_02151959022
30.3322104.7464.15063
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006509
(v1.0)
Edf1NM_02151959022
75.092599.121399.2874
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006509
(v1.0)
Edf1NM_02151959022
124.443119.283
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006509
(v1.0)
Edf1NM_02151959022
20.5645106.601
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006509
(v1.0)
Edf1NM_02151959022
01.27353
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006509
(v1.0)
238C0007D02-3Mm.29945Edf159022
U001496NAP096830-001TC919308,TC919307,TC919306Q99NE62.6752.87993.39423.84563.33913.67793.4961
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006509
(v1.0)
1438503_x_atMm.29945Edf1NM_021519.159022
238.7549.625228.875700.025619.975
0006509
(v1.0)
1448266_atMm.29945Edf1NM_021519.159022
00095.025102
0006509
(v1.0)
1440151_s_atMm.29945Edf1NM_021519.159022
281.7750291.75811.951022.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006509
(v1.0)
A_51_P160567Edf1NM_02151959022
11P0.8320.377P
Proteome N/A