DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006517
GeneEed
Synonymsl(7)5Rn
l7Rn5
Desc.embryonic ectoderm development
LocusNM_021876 chr7:97103164-97129486(-)
DB links


Entrez 13626
MGI 95286
Ensembl ENSMUSG00000030619
Vega OTTMUSG00000021134
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006447
(v2.0)
EedNM_02187613626
9.50447116.515157.0858.128866.940218.487415.6013107.56560.908521.9786
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006517
(v1.0)
Eed13626
Maternal RNA0.93881
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006447
(v2.0)
Eed13626
705/3860.3554514/3860.2963220/3862.7519522/3861.760127/386-1.7428185/386-1.6524
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006447
(v2.0)
Eed13626
387/1510.8408234/1510.5129214/1513.9993497/1513.0292/151-3.634958/151-1.9521
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006447
(v2.0)
Eed13626
48.974616529.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006447
(v2.0)
Eed13626
9.28551237.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006517
(v1.0)
EedNM_02187613626
121.058108.36643.248346.382511.0632
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006517
(v1.0)
EedNM_02187613626
180.169144.32693.2104114.04717.8399
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006517
(v1.0)
EedNM_02187613626
126.5773.47588118.229
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006517
(v1.0)
EedNM_02187613626
123.552107.27879.683
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006517
(v1.0)
EedNM_02187613626
663.969416.61
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006517
(v1.0)
EedNM_02187613626
126.6513.4282787.3936
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006517
(v1.0)
EedNM_02187613626
40.041144.784242.0354
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006517
(v1.0)
EedNM_02187613626
66.641365.5321
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006517
(v1.0)
EedNM_02187613626
87.923125.3245
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006517
(v1.0)
EedNM_02187613626
135.10394.08
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006517
(v1.0)
8607H3068G11-3Eed13626
U028847NAP122061-001TC809967,TC809964,TC809963P97462U,F,24.19564.10933.48343.59813.19323.38513.3217
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006517
(v1.0)
1448653_atMm.380914EedNM_021876.313626
2373.3253436.7751015.6751613.4251346.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006517
(v1.0)
A_51_P238643EedNM_02187613626
11P0.5890.17P
Proteome N/A