DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006555
GeneEfnb2
SynonymsELF-2
Epl5
Eplg5
Htk-L
LERK-5
Lerk5
NLERK-1
Desc.ephrin B2
LocusNM_010111 chr8:8617439-8660773(-)
DB links


Entrez 13642
MGI 105097
Ensembl ENSMUSG00000001300
Vega OTTMUSG00000022160
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006486
(v2.0)
Efnb2NM_01011113642
5.2093541.052134.831164.80526.94331.2705116.572243.873228.23932.83434
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006555
(v1.0)
Efnb213642
2-Cell Transient0.87679
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006486
(v2.0)
Efnb213642
766/4280.3262493/4280.0876489/4283.75591169/4282.7737153/4280.5691894/4280.4624
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006486
(v2.0)
Efnb213642
420/1850.6672241/1850.264461/1854.82981046/1853.812596/1851.0942530/1850.9155
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006486
(v2.0)
Efnb213642
67.808422929.61
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006486
(v2.0)
Efnb213642
10.46771646.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006555
(v1.0)
Efnb2NM_01011113642
42.676624.136348.263218.711711.644
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006555
(v1.0)
Efnb2NM_01011113642
81.976380.3018104.55732.571615.3424
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006555
(v1.0)
Efnb2NM_01011113642
44.62231.9051126.3332
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006555
(v1.0)
Efnb2NM_01011113642
43.555823.893932.527
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006555
(v1.0)
Efnb2NM_01011113642
81.525893.7563
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006555
(v1.0)
Efnb2NM_01011113642
44.64831.8790235.6745
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006555
(v1.0)
Efnb2NM_01011113642
44.684218.066919.4679
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006555
(v1.0)
Efnb2NM_01011113642
131.095201.62
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006555
(v1.0)
Efnb2NM_01011113642
21.050232.9413
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006555
(v1.0)
Efnb2NM_01011113642
4.3746211.9815
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006555
(v1.0)
573C0118F10-3Mm.4005Efnb213642
U029567NAP007330-001Efnb2;TC805160P52800U,F,24.20344.08573.74523.76073.03483.43563.8234
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006555
(v1.0)
A_51_P380970Efnb2NM_01011113642
11P0.5340.12P
0006555
(v1.0)
A_52_P340073Efnb2NM_01011113642
11P0.7520.23P
Proteome N/A