DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0006618

Gene

Eif3c

Synonyms

110kDa
Eif3s8
NIPIL(A3)
Xs
Xsl

Description

eukaryotic translation initiation factor 3, subunit C

Locus

NM_146200 UCSC: chr7:133690425-133709880(-) OLP: chr7:133690425-133709880(-)

DB links

Entrez 56347
MGI 1926966
Ensembl ENSMUSG00000030738

Feature

protein-coding

GO_BP

2 Terms

GO_MF

2 Terms

GO_CC

2 Terms

KEGG

1 Terms

see DBTMEE:2006545 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0006618 (v1.0)	Eif3c	NM_146200	56347	43.6382	4.83451	167.028	241.627	64.0189

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0006618 (v1.0)	Eif3c	NM_146200	56347	45.6278	38.3484	5.27455

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0006618 (v1.0)	Eif3c	NM_146200	56347	44.5372	4.78597	6.22628

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0006618 (v1.0)	Eif3c	NM_146200	56347	45.6543	37.8232	6.82877

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0006618 (v1.0)	Eif3c	NM_146200	56347	154.642	233.3	212.583

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0006618 (v1.0)	Eif3c	NM_146200	56347	46.5596	97.7298

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0006618 (v1.0)	Eif3c	NM_146200	56347	6.2908	11.6126

N/A

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0006618 (v1.0)	1415858_at	Mm.22776	Eif3c	NM_146200.1	56347	541.425	0	997.8	1496.45	1363.57
0006618 (v1.0)	1456083_x_at	Mm.22776	Eif3c	NM_146200.1	56347	299.35	0	700.575	1119.2	1067.4
0006618 (v1.0)	1456374_x_at	Mm.22776	Eif3c	NM_146200.1	56347	815.8	0	1679.22	2506.5	2184.73

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0006618 (v1.0)	A_51_P272005	Eif3s8	NM_146200	56347	1	1	P	0.905	0.531	P
0006618 (v1.0)	A_51_P443322	Eif3s8	NM_146200	56347	1	1	P	1.179	0.348	P
0006618 (v1.0)	A_52_P18807	Eif3s8	NM_146200	56347	1	1	P	0.69	0.167	P
0006618 (v1.0)	A_52_P303581	Eif3s8	NM_146200	56347	1	1	P	1.395	0.186	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0006618 (v1.0)	Eif3c	56347	1	5	0	1	6	0