DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006630
GeneEif4a1
SynonymsEif4
initiation factor eIF-4A long form
Desc.eukaryotic translation initiation factor 4A1
LocusNM_001159375 chr11:69480438-69485925(-)
NM_144958 chr11:69480438-69485925(-)
DB links


Entrez 13681
MGI 95303
Ensembl ENSMUSG00000059796
Vega OTTMUSG00000005995
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006557
(v2.0)
Eif4a1NM_001159375,NM_14495813681
356.402442.957796.061509.0741360.722685.41795.313640.6261308.093091.95
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006630
(v1.0)
Eif4a113681
MGA0.99143
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006557
(v2.0)
Eif4a113681
725/4290.2437452/429-0.0408731/4294.33172212/4293.689816/429-2.613592/429-2.8004
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006557
(v2.0)
Eif4a113681
380/1850.5233226/1850.1717633/1855.28641629/1854.45113/185-3.505751/185-2.4239
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006557
(v2.0)
Eif4a113681
60.966515838.59
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006557
(v2.0)
Eif4a113681
23.266111021.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006630
(v1.0)
Eif4a1NM_001159375,NM_14495813681
460.356551.809379.027942.499567.114
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006630
(v1.0)
Eif4a1FR261996,NM_001159375,NM_14495813681
383.188935.6631912.912148.835349.85
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006630
(v1.0)
Eif4a1NM_001159375,NM_14495813681
481.344130.34602.035
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006630
(v1.0)
Eif4a1NM_001159375,NM_14495813681
469.84546.268475.422
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006630
(v1.0)
Eif4a1FR261996,NM_001159375,NM_14495813681
502.29960.959
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006630
(v1.0)
Eif4a1NM_001159375,NM_14495813681
481.624128.554521.427
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006630
(v1.0)
Eif4a1NM_001159375,NM_14495813681
350.92910.021903.586
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006630
(v1.0)
Eif4a1FR261996,NM_001159375,NM_14495813681
59.530768.9021
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006630
(v1.0)
Eif4a1NM_001159375,NM_14495813681
145.06130.08
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006630
(v1.0)
Eif4a1NM_001159375,NM_14495813681
118.835172.092
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006630
(v1.0)
1427058_atMm.371557Eif4a1NM_144958.4,NM_001159375.113681
353.075841.75460.81365.6251064.625
0006630
(v1.0)
1434985_a_atMm.371557Eif4a1NM_144958.4,NM_001159375.113681
892.9251804.25974.8751784.61775.075
0006630
(v1.0)
1430980_a_atMm.371557Eif4a1NM_144958.4,NM_001159375.113681
0343.2130.875385437.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006630
(v1.0)
A_51_P113527Eif4a1NM_14495813681
11P1.410.18P
0006630
(v1.0)
A_51_P493364Eif4a1NM_14495813681
11P0.8090.28P
0006630
(v1.0)
A_52_P541826Eif4a1NM_14495813681
11P1.0480.722P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0006630
(v1.0)
Eif4a113681
2027127626148