DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006647
GeneEif5a
SynonymsD19Wsu54e
Desc.eukaryotic translation initiation factor 5A
LocusNM_001166589 chr11:69730214-69734888(-)
NM_001166590 chr11:69730214-69734132(-)
NM_001166596 chr11:69730214-69734587(-)
NM_001166591 chr11:69730214-69734888(-)
NM_001166593 chr11:69730214-69735460(-)
NM_001166595 chr11:69730214-69734777(-)
NM_001166592 chr11:69730214-69734449(-)
NM_181582 chr11:69730214-69734888(-)
NM_001166594 chr11:69730214-69734449(-)
DB links


Entrez 276770
MGI 106248
Ensembl ENSMUSG00000078812
Vega OTTMUSG00000006023
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006574
(v2.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
340.957173.647378.82439.017929.8371084.32682.906544.41865.0911474.23
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006647
(v1.0)
Eif5a276770
Major ZGA0.95778
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006574
(v2.0)
Eif5a276770
723/4140.2909467/4140.0575661/4144.23661846/4143.4821/414-2.1907140/414-2.1515
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006574
(v2.0)
Eif5a276770
417/2000.545253/2000.2219552/2004.98341303/2004.01815/200-3.030864/200-2.2166
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006574
(v2.0)
Eif5a276770
67.388720033.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006574
(v2.0)
Eif5a276770
17.384214412.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
180.055260.637326.938644.384486.927
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
118.618135.947205.805337.729310.315
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
188.264124.696284.361
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
183.764258.02403.607
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
1599.752989.36
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
188.374122.988442.663
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
302.693622.178597.199
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
437.133470.384
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
97.605409.42
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006647
(v1.0)
Eif5aNM_001166589,NM_001166590,NM_001166591,NM_001166592,NM_001166593,NM_001166594,NM_001166595,NM_001166596,NM_181582276770
487.742329.33
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006647
(v1.0)
18114L0062F08-3Mm.196607Eif5a28059
U032990NAP095515-001Eif5a;TC870975,TC870974,TC870973,TC857702,TC857695,TC857685P10159U,F,24.85254.87014.63225.41545.19555.31495.1721
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006647
(v1.0)
1451470_s_atMm.18026Eif5aNM_001166589.1,NM_001166590.1,NM_001166591.1,NM_001166592.1,NM_181582.4,NM_001166593.1,NM_001166596.1,NM_001166594.1,NM_001166595.1276770
1765.5253258.553636.96390.6254785.175
0006647
(v1.0)
1437859_x_atMm.18026Eif5aNM_001166589.1,NM_001166590.1,NM_001166591.1,NM_001166592.1,NM_181582.4,NM_001166593.1,NM_001166596.1,NM_001166594.1,NM_001166595.1276770
540.15991.81090.252227.351924.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006647
(v1.0)
A_51_P120201Eif5aNM_181582276770
11P0.6210.131P
0006647
(v1.0)
A_52_P48155Eif5aNM_181582276770
11P0.3290.0627P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0006647
(v1.0)
Eif5a276770
7116304113