DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006840
GeneErcc4
SynonymsXpf
Desc.excision repair cross-complementing rodent repair deficiency, complementation group 4
LocusNM_015769 chr16:13109829-13152102(+)
DB links


Entrez 50505
MGI 1354163
Ensembl ENSMUSG00000022545
Vega OTTMUSG00000024311
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006766
(v2.0)
Ercc4NM_01576950505
3.621053.058534.683324.916315.216013.614812.295474.672365.953795.90787
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006840
(v1.0)
Ercc450505
MGA0.97948
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006766
(v2.0)
Ercc450505
552/389-0.0079349/389-0.272149/3892.1819355/3891.194143/389-1.1018361/389-0.7048
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006766
(v2.0)
Ercc450505
331/2050.1776171/205-0.3757145/2053.0284332/2052.013622/205-1.1271196/205-0.66
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006766
(v2.0)
Ercc450505
69.033116541.84
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006766
(v2.0)
Ercc450505
26.908612122.24
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006840
(v1.0)
Ercc4NM_01576950505
3.18073.255053.662223.618171.60624
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006840
(v1.0)
Ercc4NM_01576950505
3.9513511.35195.041178.070242.38596
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006840
(v1.0)
Ercc4NM_01576950505
3.325721.324263.55133
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006840
(v1.0)
Ercc4NM_01576950505
3.246233.222373.46323
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006840
(v1.0)
Ercc4NM_01576950505
11.52995.94424
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006840
(v1.0)
Ercc4NM_01576950505
3.327651.306123.79835
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006840
(v1.0)
Ercc4NM_01576950505
3.390653.493494.12447
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006840
(v1.0)
Ercc4NM_01576950505
4.223624.98269
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006840
(v1.0)
Ercc4NM_01576950505
0.4475510.683273
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006840
(v1.0)
Ercc4NM_01576950505
0.3865540.0831046
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006840
(v1.0)
2655C0348G09-3Mm.37682Ercc450505
Ercc42.8892.94853.10552.99932.86233.08192.9546
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006840
(v1.0)
1448984_atMm.287837Ercc4NM_015769.250505
0017800
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006840
(v1.0)
A_51_P210082Ercc4NM_01576950505
11P0.6220.134P
Proteome N/A