DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006887
GeneEsrrb
SynonymsERR2
ERRb
Estrrb
Desc.estrogen related receptor, beta
LocusNM_001159500 chr12:87702067-87862578(+)
NM_011934 chr12:87762594-87862578(+)
DB links


Entrez 26380
MGI 1346832
Ensembl ENSMUSG00000021255
Vega OTTMUSG00000023036
Featureprotein-coding
GO(BP)
  •   9 Terms
      in utero embryonic development (GO:0001701)
      trophectodermal cellular morphogenesis (GO:0001831)
      trophectodermal cell proliferation (GO:0001834)
      embryonic placenta development (GO:0001892)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      stem cell maintenance (GO:0019827)
      steroid hormone mediated signaling pathway (GO:0043401)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006834
(v2.0)
EsrrbNM_001159500,NM_01193426380
0.04990614.24276.0047516.63831.136121.7630.009089477.2225725.361792.395
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006887
(v1.0)
Esrrb26380
MGA0.93909
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006834
(v2.0)
Esrrb26380
650/510-0.1625407/510-0.440714/510-1.520364/510-1.6478198/5100.68831679/5101.1182
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006834
(v2.0)
Esrrb26380
269/201-0.0919180/201-0.27395/201-1.549623/201-1.752892/2010.9163734/2011.265
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006834
(v2.0)
Esrrb26380
109.816411893.06
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006834
(v2.0)
Esrrb26380
59.47216690.11
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006887
(v1.0)
EsrrbNM_001159500,NM_01193426380
14.81074.1532912.386321.57770.00696856
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006887
(v1.0)
EsrrbNM_001159500,NM_01193426380
15.48590.01825384.53133
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006887
(v1.0)
EsrrbNM_001159500,NM_01193426380
15.11584.111595.36426
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006887
(v1.0)
EsrrbNM_001159500,NM_01193426380
15.49490.01800385.88334
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006887
(v1.0)
EsrrbNM_001159500,NM_01193426380
11.467820.834117.5373
SOLiD_NMNR_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006887
(v1.0)
EsrrbNM_001159500,NM_01193426380
12.56477.31058
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006887
(v1.0)
EsrrbNM_001159500,NM_01193426380
7.702074.31199
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0006887
(v1.0)
2314C0310E12-3Mm.90048Esrrb26380
U014218NAP104672-1Esrrb;Q61539U,F,23.16642.99612.70973.08773.01343.21572.9465
0006887
(v1.0)
5091NM_011934.1Mm.90048Esrrb26380
U014218NAP076282-1Esrrb;TC943094Q61539U,F,22.34312.49232.63112.46422.60612.5182.4277
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006887
(v1.0)
1436926_atMm.235550EsrrbNM_001159500.1,NM_011934.426380
0055.690.32547.275
0006887
(v1.0)
1441921_x_atMm.235550EsrrbNM_001159500.1,NM_011934.426380
000657.3389.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006887
(v1.0)
A_51_P419047EsrrbNM_01193426380
11P0.6770.172P
Proteome N/A