DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0006952
GeneExosc9
Synonymsp5
p6
PM/Scl-75
Pmscl1
RRP45
Desc.exosome component 9
LocusNM_019393 chr3:36451528-36464649(+)
DB links


Entrez 50911
MGI 1355319
Ensembl ENSMUSG00000027714
Vega OTTMUSG00000002113
Featureprotein-coding
GO(BP)
  •   6 Terms
      nuclear-transcribed mRNA catabolic process (GO:0000956)
      rRNA processing (GO:0006364)
      positive regulation of cell growth (GO:0030307)
      exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay (GO:0043928)
      nuclear mRNA surveillance (GO:0071028)
      nuclear polyadenylation-dependent rRNA catabolic process (GO:0071035)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2006901
(v2.0)
Exosc9NM_01939350911
14.314713.42658.6472520.441349.423447.548725.10954.9899742.304961.3554
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0006952
(v1.0)
Exosc950911
MGA0.95558
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006901
(v2.0)
Exosc950911
644/3830.2363482/3830.215224/3832.7886470/3831.6202110/3830.2554626/3830.1092
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2006901
(v2.0)
Exosc950911
294/1450.504226/1450.5211218/1454.08447/1452.933924/145-0.5191159/145-0.4626
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006901
(v2.0)
Exosc950911
55.050812643.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2006901
(v2.0)
Exosc950911
21.7888226.57
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006952
(v1.0)
Exosc9NM_01939350911
13.95296.0060915.22234.305517.9236
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0006952
(v1.0)
Exosc9NM_01939350911
50.809516.088724.588171.196655.0736
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0006952
(v1.0)
Exosc9NM_01939350911
14.5895.235036.55277
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0006952
(v1.0)
Exosc9NM_01939350911
14.24035.945783.69833
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0006952
(v1.0)
Exosc9NM_01939350911
21.756918.1241
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0006952
(v1.0)
Exosc9NM_01939350911
14.59755.163334.0562
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0006952
(v1.0)
Exosc9NM_01939350911
14.093233.123429.3029
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0006952
(v1.0)
Exosc9NM_01939350911
82.270475.5714
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0006952
(v1.0)
Exosc9NM_01939350911
3.042626.69874
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0006952
(v1.0)
Exosc9NM_01939350911
15.394918.6363
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0006952
(v1.0)
1418462_atMm.116711Exosc9NM_019393.250911
278.4168.525146.825663.8384.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0006952
(v1.0)
A_51_P416243Exosc9NM_01939350911
11P1.0430.76P
Proteome N/A