DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007228
GeneFam53c
Synonyms
Desc.family with sequence similarity 53, member C
LocusNM_175104 chr18:34918560-34933414(+)
DB links


Entrez 66306
MGI 1913556
Ensembl ENSMUSG00000034300
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007158
(v2.0)
Fam53cNM_17510466306
20.216687.1517179.04649.633118.20536.879413.3565205.46822.21266.7235
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007228
(v1.0)
Fam53c66306
Minor ZGA0.98842
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007158
(v2.0)
Fam53c66306
828/4780.2793531/4780.03541030/4784.67392869/4783.909764/478-0.8332465/478-0.6375
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007158
(v2.0)
Fam53c66306
355/1990.3208257/1990.2516863/1995.63391909/1994.575915/199-1.6087113/199-1.4038
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007158
(v2.0)
Fam53c66306
75.033913356.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007158
(v2.0)
Fam53c66306
20.567427.78
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007228
(v1.0)
Fam53cNM_17510466306
90.6166124.49236.940512.58469.42085
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007228
(v1.0)
Fam53cNM_17510466306
94.74797.39342135.823
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007228
(v1.0)
Fam53cNM_17510466306
92.4834123.242152.242
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007228
(v1.0)
Fam53cNM_17510466306
94.8037.29216166.974
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007228
(v1.0)
Fam53cNM_17510466306
34.201112.150915.4289
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007228
(v1.0)
Fam53cFR203532,FR239697,NM_17510466306
82.2228156.225
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007228
(v1.0)
Fam53cNM_17510466306
50.45411.6101
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007228
(v1.0)
Fam53cNM_17510466306
27.911525.3386
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007228
(v1.0)
6496H3026B08-3Mm.294242810012G03Rik66306
U018548NAP094392-001TC830722,TC830721U,F,22.78862.76252.3732.4012.24592.24632.1903
0007228
(v1.0)
9869H3087D12-32810012G03Rik66306
U018548NAP094392-001TC830722U,F,23.63633.6913.43623.53593.30853.43933.3454
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007228
(v1.0)
1452669_atMm.29424Fam53cNM_175104.466306
397.525386.425417.325095.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007228
(v1.0)
A_51_P1214322810012G03RikNM_17510466306
11P0.9640.776P
Proteome N/A