DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007367
GeneFbxo28
SynonymsD1Ertd578e
Fbx28
Desc.F-box protein 28
LocusNM_175127 chr1:184243233-184271737(-)
DB links


Entrez 67948
MGI 1261890
Ensembl ENSMUSG00000047539
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007288
(v2.0)
Fbxo28NM_17512767948
8.8931291.05374.518912.10517.372357.868847.123354.79019.78828.31637
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007367
(v1.0)
Fbxo2867948
Maternal RNA0.99554
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007288
(v2.0)
Fbxo2867948
740/4150.3209505/4150.1666148/4152.0817292/4150.820465/415-0.6092407/415-0.6255
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007288
(v2.0)
Fbxo2867948
362/1840.4613234/1840.2294141/1843.1351272/1841.880918/184-1.2501106/184-1.3823
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007288
(v2.0)
Fbxo2867948
79.330913857.49
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007288
(v2.0)
Fbxo2867948
24.94548130.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007367
(v1.0)
Fbxo28NM_17512767948
94.6251.54779.015535.101295.05247
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007367
(v1.0)
Fbxo28FR054390,NM_17512767948
115.56756.752110.25035.999885.91608
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007367
(v1.0)
Fbxo28NM_17512767948
98.93393.252356.2397
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007367
(v1.0)
Fbxo28NM_17512767948
96.569351.030140.6231
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007367
(v1.0)
Fbxo28FR054390,NM_17512767948
57.631646.3922
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007367
(v1.0)
Fbxo28NM_17512767948
98.99143.2077644.554
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007367
(v1.0)
Fbxo28NM_17512767948
8.346974.92556.84733
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007367
(v1.0)
Fbxo28FR054390,NM_17512767948
5.935198.14786
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007367
(v1.0)
Fbxo28NM_17512767948
43.26727.43047
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007367
(v1.0)
Fbxo28NM_17512767948
37.763227.6617
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007367
(v1.0)
1429158_atMm.30737Fbxo28NM_175127.267948
1919.6251164.9275.975225.475359.75
0007367
(v1.0)
1437348_atMm.30737Fbxo28NM_175127.267948
4774.8752538.525921.825250.975982.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007367
(v1.0)
A_51_P445392Fbxo28NM_17512767948
11P0.9080.511P
0007367
(v1.0)
A_52_P381147Fbxo28NM_17512767948
11P0.7330.268P
0007367
(v1.0)
A_52_P437734Fbxo28NM_17512767948
11P1.3630.198P
Proteome N/A