DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007369
GeneFbxo30
SynonymsFbxw7
AGO
Cdc4
Fbw7
Fbxw6
SEL-10
Desc.F-box and WD-40 domain protein 7
LocusNM_027968 chr10:11001128-11017767(+)
NM_001168297 chr10:11001385-11017767(+)
DB links


Entrez 71865
MGI 1919115
Ensembl ENSMUSG00000047648
Vega OTTMUSG00000032736
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007290
(v2.0)
Fbxo30NM_001168297,NM_02796871865
34.945842.807223.127413.172214.393816.056816.060117.860517.646713.819
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007369
(v1.0)
Fbxo3071865
Maternal RNA0.88571
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007290
(v2.0)
Fbxo3071865
709/3330.576547/3330.5983685/3334.59211696/3333.6698186/3331.2074762/3330.5935
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007290
(v2.0)
Fbxo3071865
368/1290.994265/1290.9172662/1295.8331503/1294.846878/1291.3045291/1290.5706
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007290
(v2.0)
Fbxo3071865
45.175913034.75
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007290
(v2.0)
Fbxo3071865
10.21959410.87
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
44.476315.9779.812649.9962511.3211
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
53.508917.403311.104211.516713.1337
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
46.50412.780117.4312
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
45.392515.816613.2698
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
17.673914.895
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
46.53112.605114.5538
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
9.084989.6517712.1893
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
11.392114.4182
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
51.12765.09593
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007369
(v1.0)
Fbxo30NM_001168297,NM_02796871865
2.84916.71212
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007369
(v1.0)
4272C0925G12-3Mm.1429531700026A16Rik71865
U011261NAP002241-002TC859594Q9D9X5U,F,23.1342.93062.35282.42212.13982.26492.4999
0007369
(v1.0)
15522K0200H12-3Mm.1429531700026A16Rik71865
U011261NAP002241-001TC859595,TC859594Q9D9X5U,F,22.96052.92142.84323.0052.91532.74872.7905
0007369
(v1.0)
21718L0905H07-31700026A16Rik71865
U011261NAP002241-002TC859594Q9D9X5U,F,22.40181.73761.25221.51662.06521.87531.9305
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007369
(v1.0)
1453136_atMm.276229Fbxo30NM_027968.3,NM_001168297.171865
1165.4614.675127.45209.225145.55
0007369
(v1.0)
1436550_atMm.276229Fbxo30NM_027968.3,NM_001168297.171865
393.175146.4250201.25286.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007369
(v1.0)
A_51_P223036Fbxo30NM_02796871865
11P0.8280.31P
0007369
(v1.0)
A_52_P314421Fbxo30AK04717471865
11P1.0660.642P
0007369
(v1.0)
A_52_P604568Fbxo30NM_02796871865
11P0.690.167P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007369
(v1.0)
Fbxo3071865
220230