DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007380
GeneFbxo42
Synonyms
Desc.F-box protein 42
LocusNM_172518 chr4:140703837-140759977(+)
DB links


Entrez 213499
MGI 1924992
Ensembl ENSMUSG00000028920
Vega OTTMUSG00000010145
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007301
(v2.0)
Fbxo42NM_172518213499
5.9434636.476560.407533.655116.28867.505876.0176572.060717.13366.07131
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007380
(v1.0)
Fbxo42213499
Minor ZGA0.95408
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007301
(v2.0)
Fbxo42213499
673/3910.27408/391-0.0547188/3912.5082491/3911.653530/391-1.6143222/391-1.4098
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007301
(v2.0)
Fbxo42213499
398/1750.6695202/1750.0903173/1753.4961467/1752.729817/175-1.2574103/175-1.3512
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007301
(v2.0)
Fbxo42213499
77.04615948.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007301
(v2.0)
Fbxo42213499
15.27299416.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007380
(v1.0)
Fbxo42NM_172518213499
37.929541.83925.027311.29744.23549
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007380
(v1.0)
Fbxo42NM_172518213499
67.320869.320945.724321.85848.35793
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007380
(v1.0)
Fbxo42NM_172518213499
39.65882.1735845.6473
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007380
(v1.0)
Fbxo42NM_172518213499
38.710941.418953.3332
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007380
(v1.0)
Fbxo42NM_172518213499
62.622687.6535
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007380
(v1.0)
Fbxo42NM_172518213499
39.68182.1438158.4941
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007380
(v1.0)
Fbxo42NM_172518213499
23.171310.908111.8661
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007380
(v1.0)
Fbxo42NM_172518213499
18.161221.3796
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007380
(v1.0)
Fbxo42NM_172518213499
6.2094313.4809
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007380
(v1.0)
Fbxo42NM_172518213499
28.560223.4969
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007380
(v1.0)
2198C0300G08-3LOC213499213499
U042590NAP007143-001TC837210Q99KY2U,F,23.38223.52643.91823.72333.29733.52763.3485
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007380
(v1.0)
1427071_atMm.28865Fbxo42NM_172518.3213499
0053.3037.55
0007380
(v1.0)
1453382_atMm.28865Fbxo42NM_172518.3213499
157.650213.625205.1750
0007380
(v1.0)
1435356_atMm.28865Fbxo42NM_172518.3213499
01118.975000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007380
(v1.0)
A_52_P586671Fbxo42NM_172518213499
11P1.4010.185P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007380
(v1.0)
Fbxo42213499
010010