DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007446
GeneFen1
Synonyms
Desc.flap structure specific endonuclease 1
LocusNM_001271614 chr19:10273622-10278433(-)
NM_001271615 chr19:10273622-10278433(-)
NM_007999 chr19:10273622-10278433(-)
DB links


Entrez 14156
MGI 102779
Ensembl ENSMUSG00000024742
Vega OTTMUSG00000034053
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007367
(v2.0)
Fen1NM_001271614,NM_001271615,NM_00799914156
11.003337.790731.193620.587224.571947.129626.99536.64224.154157.6971
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007446
(v1.0)
Fen114156
Maternal RNA0.95028
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007367
(v2.0)
Fen114156
793/558-0.0058498/558-0.2798521/5583.47381297/5582.542714/558-3.1702131/558-2.676
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007367
(v2.0)
Fen114156
334/2090.1628230/2090.0218480/2094.72221096/2093.7064/209-3.356157/209-2.4429
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007367
(v2.0)
Fen114156
95.188816757
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007367
(v2.0)
Fen114156
15.8738319.12
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007446
(v1.0)
Fen1NM_00799914156
37.823520.98114.789516.539218.5237
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007446
(v1.0)
Fen1NM_00799914156
49.689724.299421.21219.116621.4116
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007446
(v1.0)
Fen1NM_00799914156
39.54793.878822.8908
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007446
(v1.0)
Fen1NM_00799914156
38.602720.770426.3893
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007446
(v1.0)
Fen1NM_00799914156
25.130833.5758
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007446
(v1.0)
Fen1NM_00799914156
39.57093.8256728.9429
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007446
(v1.0)
Fen1NM_00799914156
13.692815.969216.1107
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007446
(v1.0)
Fen1NM_00799914156
18.909819.0754
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007446
(v1.0)
Fen1NM_00799914156
8.017615.33947
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007446
(v1.0)
5786H3009B04-3Mm.2952Fen114156
U038796NAP094676-001Fen1;TC911199,TC830541,TC830540,TC830539P39749U,F,22.74793.03943.01753.39883.01353.30093.2221
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007446
(v1.0)
1421731_a_atMm.2952Fen1NM_007999.314156
140.275091.075122.3238.825
0007446
(v1.0)
1436454_x_atMm.2952Fen1NM_007999.314156
1057.50814.251421.851095.05
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007446
(v1.0)
Fen114156
110110