DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007748
GeneFxr1
SynonymsFxr1h
Fxr1p
Desc.fragile X mental retardation gene 1, autosomal homolog
LocusNM_008053 chr3:33919001-33968266(+)
NM_001113188 chr3:33919001-33968266(+)
NM_001113189 chr3:33919001-33968266(+)
DB links


Entrez 14359
MGI 104860
Ensembl ENSMUSG00000027680
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007675
(v2.0)
Fxr1NM_001113188,NM_001113189,NM_00805314359
375.274255.936472.887128.054126.667176.64968.1006417.159120.738185.339
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007748
(v1.0)
Fxr114359
Minor ZGA0.99929
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007675
(v2.0)
Fxr114359
820/3780.6031665/3780.6973987/3784.94163581/3784.56681/378-0.1627463/378-0.3058
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007675
(v2.0)
Fxr114359
390/1281.0886279/1281.0023644/1285.80361943/1285.22822/128-0.4648125/128-0.6274
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007675
(v2.0)
Fxr114359
34.11178639.66
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007675
(v2.0)
Fxr114359
9.05116015.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007748
(v1.0)
Fxr1NM_001113188,NM_001113189,NM_00805314359
265.908327.75495.360787.987647.7988
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007748
(v1.0)
Fxr1FR405281,NM_001113188,NM_001113189,NM_00805314359
1467.261431.28448.587495.366221.399
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007748
(v1.0)
Fxr1NM_001113188,NM_001113189,NM_00805314359
278.031137.24357.587
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007748
(v1.0)
Fxr1NM_001113188,NM_001113189,NM_00805314359
271.386324.464308.953
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007748
(v1.0)
Fxr1FR405281,NM_001113188,NM_001113189,NM_00805314359
4964.663961.96
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007748
(v1.0)
Fxr1NM_001113188,NM_001113189,NM_00805314359
278.193135.361338.85
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007748
(v1.0)
Fxr1NM_001113188,NM_001113189,NM_00805314359
88.289184.955583.6321
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007748
(v1.0)
Fxr1FR405281,NM_001113188,NM_001113189,NM_00805314359
732.054626.45
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007748
(v1.0)
Fxr1NM_001113188,NM_001113189,NM_00805314359
509.759100.514
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007748
(v1.0)
Fxr1NM_001113188,NM_001113189,NM_00805314359
10.766424.4113
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007748
(v1.0)
3335C0640F03-3Mm.160342Fxr1h14359
U023929NAP013446-001TC9164002.65272.65332.8322.612.84892.60232.7692
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007748
(v1.0)
1417598_a_atMm.259021Fxr1NM_001113188.1,NM_001113189.1,NM_008053.214359
1799.3828.551530.775501.45806.075
0007748
(v1.0)
1452247_atMm.259021Fxr1NM_001113188.1,NM_001113189.1,NM_008053.214359
375.35828.175235.8598.27593.825
0007748
(v1.0)
1436400_atMm.259021Fxr1NM_001113188.1,NM_001113189.1,NM_008053.214359
431.825428.325298.4287.225249.775
0007748
(v1.0)
1442059_atMm.259021Fxr1NM_001113188.1,NM_001113189.1,NM_008053.214359
365.075671.175199.925205.75219.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007748
(v1.0)
A_51_P372463Fxr1hNM_00805314359
11P0.6070.127P
0007748
(v1.0)
A_52_P657593Fxr1hAK00422014359
11P0.8180.293P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007748
(v1.0)
Fxr114359
1.51731.83217