DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007867
GeneGapdh
SynonymsGapd
Desc.glyceraldehyde-3-phosphate dehydrogenase
LocusNM_008084 chr6:125111870-125115601(-)
DB links


Entrez 14433
MGI 95640
Ensembl ENSMUSG00000057666
Vega OTTMUSG00000027118
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
  •   1 Terms
      glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (GO:0004365)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007796
(v2.0)
GapdhNM_001289726,NM_00808414433
254.5378.9684923.57059.205126.278064124.97215.62138.80864.761184885.63
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007867
(v1.0)
Gapdh14433
1-Cell Transient0.97107
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007796
(v2.0)
Gapdh14433
666/540-0.2098298/540-0.9713103/5401.1926373/5400.794710/540-3.5707167/540-2.2821
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007796
(v2.0)
Gapdh14433
348/2310.078112/231-1.152995/2312.2604346/2311.90274/231-3.497892/231-1.9102
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007796
(v2.0)
Gapdh14433
99.946818653.73
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007796
(v2.0)
Gapdh14433
26.134810724.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007867
(v1.0)
GapdhNM_00808414433
10.8719.15338.016645.0755180.395
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007867
(v1.0)
GapdhNM_00808414433
0.008430520.04778700.01564431.46367
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007867
(v1.0)
GapdhNM_00808414433
11.3656110.23220.8967
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007867
(v1.0)
GapdhNM_00808414433
11.093918.96133.2998
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007867
(v1.0)
GapdhNM_00808414433
0.04847930.0414102
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007867
(v1.0)
GapdhNM_00808414433
11.3722108.72336.5221
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007867
(v1.0)
GapdhNM_00808414433
7.422164.90063.88254
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007867
(v1.0)
GapdhNM_00808414433
0.01547170.0341581
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007867
(v1.0)
GapdhNM_00808414433
8.38064.79013
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007867
(v1.0)
GapdhNM_00808414433
0.2033790.629628
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007867
(v1.0)
884C0155E04-3Mm.5289Gapd14433
NAP111338-1GapdTC8242353.43783.47523.2853.48223.22573.41353.7536
0007867
(v1.0)
5005G0119A06-3Mm.5289Gapd14433
U022457NAP092377-001TC877146,TC877145,TC824228,TC824203,TC824184,TC824167,TC824164P16858U,F,23.72313.68133.45163.67713.57783.64934.0724
0007867
(v1.0)
17995L0043B10-3Mm.5289Gapd14433
3.25373.12933.11823.11583.33283.28543.2611
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007867
(v1.0)
AFFX-GapdhMur/M32599_5_atMm.458138Gapdh14433
106.575154.775126.02598.75470.975
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007867
(v1.0)
Gapdh14433
032320689382