DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007870
GeneGapvd1
Synonyms
Desc.GTPase activating protein and VPS9 domains 1
LocusNM_025709 chr2:34532502-34610752(-)
DB links


Entrez 66691
MGI 1913941
Ensembl ENSMUSG00000026867
Vega OTTMUSG00000012001
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007799
(v2.0)
Gapvd1NM_02570966691
11.83313.577784.6690115.00458.83476.604838.887253.809289.071445.6033
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007870
(v1.0)
Gapvd166691
2-Cell Transient0.98765
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007799
(v2.0)
Gapvd166691
518/2400.5951380/2400.544996/2402.2229226/2401.235982/2400.5011484/2400.4111
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007799
(v2.0)
Gapvd166691
339/1300.865219/1300.632392/1302.9891198/1301.917948/1300.6046287/1300.5397
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007799
(v2.0)
Gapvd166691
20.82519422.15
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007799
(v2.0)
Gapvd166691
5.6733747.67
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007870
(v1.0)
Gapvd1NM_02570966691
3.717493.2379311.19226.13916.09477
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007870
(v1.0)
Gapvd1NM_02570966691
60.839430.813894.889962.208847.2607
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007870
(v1.0)
Gapvd1NM_02570966691
3.886974.32753.53265
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007870
(v1.0)
Gapvd1NM_02570966691
3.794073.205422.81782
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007870
(v1.0)
Gapvd1NM_02570966691
16.437821.2279
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007870
(v1.0)
Gapvd1NM_02570966691
3.889234.268233.09049
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007870
(v1.0)
Gapvd1NM_02570966691
10.36225.927546.25576
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007870
(v1.0)
Gapvd1NM_02570966691
38.487761.2685
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007870
(v1.0)
Gapvd1NM_02570966691
4.43639.13542
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007870
(v1.0)
Gapvd1NM_02570966691
4.535125.16867
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007870
(v1.0)
4098C0915F12-3Mm.1545034432404J10Rik66691
U022528NAP032646-14432404J10Rik;TC886842Q9CRS2U,F,22.46512.52061.97642.47062.55262.45832.5752
0007870
(v1.0)
5487H3001D01-3Mm.1545034432404J10Rik66691
TC8868432.68172.71192.70842.68342.58212.75362.7536
0007870
(v1.0)
9940H3088C11-34432404J10Rik66691
U022528NAP100957-0014432404J10Rik;TC886842Q9CRS2U,F,22.91712.84672.94673.02952.592.67552.6229
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007870
(v1.0)
1457093_atMm.156452Gapvd1NM_025709.266691
575.45561.525498.52500
0007870
(v1.0)
1429454_atMm.156452Gapvd1NM_025709.266691
01019.851112.813051522.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007870
(v1.0)
A_51_P326393Gapvd1NM_02570966691
11P0.430.0804P
0007870
(v1.0)
A_52_P214624Gapvd1AK00811466691
11P0.690.176P
Proteome N/A