DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007871
GeneGar1
SynonymsGAR1
Nola1
Desc.GAR1 ribonucleoprotein homolog (yeast)
LocusNM_026578 chr3:129527830-129534314(-)
DB links


Entrez 68147
MGI 1930948
Ensembl ENSMUSG00000028010
Vega OTTMUSG00000028857
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007800
(v2.0)
Gar1NM_02657868147
9.7085912.715611.448646.972675.954220.000812.212212.80968.638521.2001
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007871
(v1.0)
Gar168147
MGA0.99633
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007800
(v2.0)
Gar168147
808/4550.315535/4550.1172253/4552.7221613/4551.7557116/4550.0853711/4550.0445
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007800
(v2.0)
Gar168147
395/1580.8052262/1580.6103227/1584.0234428/1582.749526/158-0.5286187/158-0.3537
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007800
(v2.0)
Gar168147
51.830413837.56
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007800
(v2.0)
Gar168147
11.56277715.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007871
(v1.0)
Gar1NM_02657868147
13.21457.8871534.93152.68088.57705
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007871
(v1.0)
Gar1NM_02657868147
211.08592.2836474.435758.023112.959
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007871
(v1.0)
Gar1NM_02657868147
13.81693.550538.60505
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007871
(v1.0)
Gar1NM_02657868147
13.48677.807959.53097
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007871
(v1.0)
Gar1NM_02657868147
8.5702410.7657
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007871
(v1.0)
Gar1NM_02657868147
13.8253.501910.4532
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007871
(v1.0)
Gar1NM_02657868147
32.340650.865447.6132
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007871
(v1.0)
Gar1NM_02657868147
246.481251.345
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007871
(v1.0)
Gar1NM_02657868147
22.576260.2095
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007871
(v1.0)
Gar1NM_02657868147
57.611254.9017
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007871
(v1.0)
5536H3002D06-3Mm.24873Nola168147
U024642NAP008405-001Nola1;TC884672,TC870469,TC870468Q9CY66U,F,23.75323.78543.34233.49163.02963.30533.068
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007871
(v1.0)
1418305_s_atMm.24873Gar1NM_026578.368147
610.7839.65738.652194.251246.05
Agilent44K N/A
Proteome N/A