DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007892
GeneGatad2a
Synonyms
Desc.GATA zinc finger domain containing 2A
LocusNM_001113345 chr8:72430968-72520278(-)
NM_145596 chr8:72430968-72520278(-)
NM_001113346 chr8:72430968-72498282(-)
DB links


Entrez 234366
MGI 2384585
Ensembl ENSMUSG00000036180
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007824
(v2.0)
Gatad2aNM_001113346,NM_001286450,NM_145596234366
28.137653.9752121.56859.115132.8123.132918.806203.53736.776120.839
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007892
(v1.0)
Gatad2a234366
Minor ZGA0.98838
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007824
(v2.0)
Gatad2a234366
708/499-0.0081425/499-0.347257/4992.6147879/4992.142522/499-2.3935170/499-2.1429
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007824
(v2.0)
Gatad2a234366
354/1660.5769180/1660.0006230/1663.976701/1663.38997/166-2.35372/166-1.7831
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007824
(v2.0)
Gatad2a234366
41.49039444.14
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007824
(v2.0)
Gatad2a234366
11.13736118.26
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007892
(v1.0)
Gatad2aNM_001113345,NM_001113346,NM_145596234366
56.116683.99443.711522.588313.3315
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007892
(v1.0)
Gatad2aFR351072,NM_001113345,NM_001113346,NM_145596234366
416.393483.781249.154142.8786.9146
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007892
(v1.0)
Gatad2aNM_001113345,NM_001113346,NM_145596234366
58.675110.291491.6393
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007892
(v1.0)
Gatad2aNM_001113345,NM_001113346,NM_145596234366
57.272783.1506150.508
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007892
(v1.0)
Gatad2aFR351072,NM_001113345,NM_001113346,NM_145596234366
740.2371759.95
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007892
(v1.0)
Gatad2aNM_001113345,NM_001113346,NM_145596234366
58.709210.1504165.072
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007892
(v1.0)
Gatad2aNM_001113345,NM_001113346,NM_145596234366
40.4721.809925.3816
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007892
(v1.0)
Gatad2aFR351072,NM_001113345,NM_001113346,NM_145596234366
175.175238.283
Illumina_Oo-2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007892
(v1.0)
Gatad2aNM_001113345,NM_001113346,NM_145596234366
49.187752.66
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007892
(v1.0)
1104C0178D07-3Mm.21919BC031407234366
U029905NAP096533-001BC031407;TC825315,TC825314U,F,23.73733.65253.17063.24272.94963.09823.0089
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007892
(v1.0)
1423992_atMm.270044Gatad2aNM_145596.3,NM_001113345.1,NM_001113346.1234366
366.275523.35365230.725192
0007892
(v1.0)
1455505_atMm.270044Gatad2aNM_145596.3,NM_001113345.1,NM_001113346.1234366
27.6538.4539.57500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007892
(v1.0)
A_52_P580458Gatad2aNM_145596234366
11P1.4670.162P
0007892
(v1.0)
A_52_P594627Gatad2aNM_145596234366
11P1.3820.272P
Proteome N/A