DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007893
GeneGatad2b
Synonymsp66beta
Desc.GATA zinc finger domain containing 2B
LocusNM_139304 chr3:90145576-90162042(+)
DB links


Entrez 229542
MGI 2443225
Ensembl ENSMUSG00000042390
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007825
(v2.0)
Gatad2bNM_139304229542
6.90916116.63591.163646.405235.42763.597447.59804105.08142.16313.45468
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007893
(v1.0)
Gatad2b229542
Maternal RNA0.958
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007825
(v2.0)
Gatad2b229542
543/3040.3231462/3040.486335/3040.4666303/3041.319415/304-2.209861/304-2.8859
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007825
(v2.0)
Gatad2b229542
211/940.6481180/940.81459/940.193274/940.96749/94-1.237423/94-2.5536
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007825
(v2.0)
Gatad2b229542
32.99133691.64
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007825
(v2.0)
Gatad2b229542
14.08761593.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007893
(v1.0)
Gatad2bNM_139304229542
121.28963.012234.552524.57675.17493
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007893
(v1.0)
Gatad2bFR108007,FR152222,NM_139304229542
187.36886.612756.856448.032810.7744
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007893
(v1.0)
Gatad2bNM_139304229542
126.8192.5267568.7477
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007893
(v1.0)
Gatad2bNM_139304229542
123.78762.379577.7612
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007893
(v1.0)
Gatad2bFR108007,FR152222,NM_139304229542
91.9978134.322
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007893
(v1.0)
Gatad2bNM_139304229542
126.8922.4921485.2858
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007893
(v1.0)
Gatad2bNM_139304229542
31.990323.729729.3627
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007893
(v1.0)
Gatad2bFR108007,FR152222,NM_139304229542
46.629249.3879
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007893
(v1.0)
Gatad2bNM_139304229542
331.62571.1493
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007893
(v1.0)
Gatad2bNM_139304229542
63.855164.1509
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007893
(v1.0)
4935G0115E06-3Mm.103389LOC229542229542
U003493NAP081688-1TC865715,TC860626U,F,23.1263.02622.79532.92562.57842.66372.7372
0007893
(v1.0)
12969H3156A05-3Mm.103389LOC229542229542
U003493NAP050110-1TC865716U,F,23.01142.84862.72692.72172.39412.5272.3911
0007893
(v1.0)
20930L0819G02-3LOC229542229542
U003493NAP094891-001TC805535U,F,23.41363.30722.97673.11952.73032.82492.6955
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007893
(v1.0)
1425075_atMm.270999Gatad2bNM_139304.1229542
219.325482.025000
0007893
(v1.0)
1437474_atMm.270999Gatad2bNM_139304.1229542
501.4827.5347.5500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007893
(v1.0)
A_52_P494115Gatad2bNM_139304229542
11P0.6320.141P
0007893
(v1.0)
A_52_P582601Gatad2bAK173113229542
11P1.4530.166P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007893
(v1.0)
Gatad2b229542
010020