DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007900
GeneGbas
SynonymsNipsnap2
Desc.glioblastoma amplified sequence
LocusNM_008095 chr5:130230950-130264201(+)
DB links


Entrez 14467
MGI 1278343
Ensembl ENSMUSG00000029432
Vega OTTMUSG00000027638
Featureprotein-coding
GO(BP)
  •   3 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007832
(v2.0)
GbasNM_00809514467
31.362176.8397109.28720.63294.6693315.285219.8725147.9168.5162913.1145
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007900
(v1.0)
Gbas14467
Minor ZGA0.97188
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007832
(v2.0)
Gbas14467
619/4140.0673373/414-0.26692/4141.4051200/4140.280129/414-1.7432157/414-1.9878
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007832
(v2.0)
Gbas14467
326/1920.2498187/192-0.153488/1922.4034186/1921.274410/192-2.098771/192-2.0116
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007832
(v2.0)
Gbas14467
70.682115047.12
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007832
(v2.0)
Gbas14467
11.46068613.33
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007900
(v1.0)
GbasNM_00809514467
79.873875.471615.35573.2406714.0455
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007900
(v1.0)
GbasNM_00809514467
99.862784.629117.85884.8162319.8481
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007900
(v1.0)
GbasNM_00809514467
83.515411.469482.3412
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007900
(v1.0)
GbasNM_00809514467
81.519374.7138109.493
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007900
(v1.0)
GbasNM_00809514467
641.5981944.21
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007900
(v1.0)
GbasNM_00809514467
83.563911.3124120.088
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007900
(v1.0)
GbasNM_00809514467
14.21693.1295.95884
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007900
(v1.0)
GbasNM_00809514467
59.71944.506
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007900
(v1.0)
GbasNM_00809514467
79.312929.9687
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007900
(v1.0)
GbasNM_00809514467
90.8037136.795
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007900
(v1.0)
8731H3071C06-3Mm.12468Gbas14467
U006233NAP012011-001Gbas;TC887114,TC887113O55126U,F,24.23054.29473.98433.43792.57392.79653.0954
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007900
(v1.0)
1419484_a_atMm.485784GbasNM_008095.414467
157.825401.625133.425049.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007900
(v1.0)
A_51_P228276GbasNM_00809514467
11P1.2950.236P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007900
(v1.0)
Gbas14467
10138163128