DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007902
GeneGbf1
Synonyms
Desc.golgi-specific brefeldin A-resistance factor 1
LocusNM_178930 chr19:46227048-46361000(+)
DB links


Entrez 107338
MGI 1861607
Ensembl ENSMUSG00000025224
Vega OTTMUSG00000040139
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
  •   2 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007834
(v2.0)
Gbf1NM_178930107338
18.488655.765172.198222.42939.873524.7759221.083473.478110.37075.72153
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007902
(v1.0)
Gbf1107338
Minor ZGA0.95572
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007834
(v2.0)
Gbf1107338
781/4790.1921428/479-0.278163/4792.0186512/4791.4227310/4791.42221383/4790.9289
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007834
(v2.0)
Gbf1107338
288/1880.102151/188-0.429792/1882.4954218/1881.532368/1880.5801313/1880.1354
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007834
(v2.0)
Gbf1107338
45.832716927.12
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007834
(v2.0)
Gbf1107338
15.07666224.32
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007902
(v1.0)
Gbf1NM_178930107338
57.995749.773516.6816.8381614.7702
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007902
(v1.0)
Gbf1FR154986,NM_178930107338
1153.391024.87440.69208.979190.489
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007902
(v1.0)
Gbf1NM_178930107338
60.63986.7614654.3039
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007902
(v1.0)
Gbf1NM_178930107338
59.190549.273754.422
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007902
(v1.0)
Gbf1NM_178930107338
558.217408.229
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007902
(v1.0)
Gbf1NM_178930107338
60.67516.6688559.6882
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007902
(v1.0)
Gbf1NM_178930107338
15.4446.602527.2292
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007902
(v1.0)
Gbf1FR154986,NM_178930107338
211.991290.851
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007902
(v1.0)
Gbf1NM_178930107338
32.1557.20459
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007902
(v1.0)
Gbf1NM_178930107338
30.454727.1483
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007902
(v1.0)
15844K0302B03-3Mm.44823AW049900107338
U019520NAP029520-1AW049900;TC794719,TC794715U,F,23.22782.99472.87142.85943.34863.06953.1672
0007902
(v1.0)
19570L0281D01-3Mm.203930AW049900107338
U019520NAP092682-001AW049900;TC809745,TC809744U,F,24.18114.06763.13963.242.80253.06353.1557
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007902
(v1.0)
1415757_atMm.271620Gbf1NM_178930.3107338
640000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007902
(v1.0)
A_51_P140597Gbf1NM_178930107338
11P1.080.596P
0007902
(v1.0)
A_51_P144712Gbf1NM_178930107338
11P0.9730.828P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007902
(v1.0)
Gbf1107338
140140