DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007935
GeneGcn1l1
SynonymsGCN1L
Desc.GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
LocusNM_172719 chr5:116015272-116072663(+)
DB links


Entrez 231659
MGI 2444248
Ensembl ENSMUSG00000041638
Vega OTTMUSG00000014702
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007866
(v2.0)
Gcn1l1NM_172719,NR_105996231659
11.069619.42538.691076.3235511.130813.936621.176710.91479.8246210.168
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007935
(v1.0)
Gcn1l1231659
Maternal RNA0.91384
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007866
(v2.0)
Gcn1l1231659
681/4320.1435422/432-0.149699/4321.4501236/4320.45689/432-3.38994/432-2.7799
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007866
(v2.0)
Gcn1l1231659
307/1600.4251230/1600.405285/1602.5999192/1601.57937/160-2.301262/160-1.9412
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007866
(v2.0)
Gcn1l1231659
100.546513574.48
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007866
(v2.0)
Gcn1l1231659
20.58985239.6
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007935
(v1.0)
Gcn1l1NM_172719231659
20.26.043744.704447.7108914.7949
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007935
(v1.0)
Gcn1l1NM_172719231659
254.42584.361969.8517107.025192.211
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007935
(v1.0)
Gcn1l1NM_172719231659
21.1214.048266.59385
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007935
(v1.0)
Gcn1l1NM_172719231659
20.61625.983068.09283
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007935
(v1.0)
Gcn1l1NM_172719231659
207.507272.488
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007935
(v1.0)
Gcn1l1NM_172719231659
21.13333.992818.87595
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007935
(v1.0)
Gcn1l1NM_172719231659
4.355587.445176.80368
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007935
(v1.0)
Gcn1l1NM_172719231659
157.091341.461
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007935
(v1.0)
Gcn1l1NM_172719231659
4.428522.66855
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007935
(v1.0)
Gcn1l1NM_172719231659
0.8031170.647479
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007935
(v1.0)
16139K0333B08-3Mm.450244932409G22231659
U006053NAP100965-001TC914127U,F2.76532.64752.75432.79512.58732.81762.7212
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007935
(v1.0)
A_51_P125563Gcn1l1AK077013231659
11P0.01110.0161P
0007935
(v1.0)
A_52_P589101Gcn1l1AK077013231659
11P0.9850.909P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007935
(v1.0)
Gcn1l1231659
520520