DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007944
GeneGdap1
Synonyms
Desc.ganglioside-induced differentiation-associated-protein 1
LocusNM_010267 chr1:17135454-17154351(+)
DB links


Entrez 14545
MGI 1338002
Ensembl ENSMUSG00000025777
Vega OTTMUSG00000022300
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007875
(v2.0)
Gdap1NM_01026714545
0.05341688.9335179.464158.6422.84020.006203610.036309143.05529.03940.0174494
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007944
(v1.0)
Gdap114545
Minor ZGA0.90334
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007875
(v2.0)
Gdap114545
410/2670.1056341/2670.23598/267-1.3538127/2670.257192/2670.5139513/2670.3416
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007875
(v2.0)
Gdap114545
225/1400.1705168/1400.14586/140-0.840898/1400.805751/1400.5867307/1400.5303
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007875
(v2.0)
Gdap114545
41.98556267.72
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007875
(v2.0)
Gdap114545
20.63633755.77
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007944
(v1.0)
Gdap1NM_01026714545
92.3995123.721118.10615.81530.02456
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007944
(v1.0)
Gdap1NM_01026714545
113.386137.473134.50418.48340.0279865
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007944
(v1.0)
Gdap1NM_01026714545
96.61210.0195348134.982
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007944
(v1.0)
Gdap1NM_01026714545
94.303122.478105.828
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007944
(v1.0)
Gdap1NM_01026714545
892.5371112.1
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007944
(v1.0)
Gdap1NM_01026714545
96.66830.0192672116.069
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007944
(v1.0)
Gdap1NM_01026714545
109.34815.270320.1405
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007944
(v1.0)
Gdap1NM_01026714545
18.28424.3593
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007944
(v1.0)
Gdap1NM_01026714545
123.06284.3291
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007944
(v1.0)
Gdap1NM_01026714545
16.008256.3865
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007944
(v1.0)
7711H3052G11-5Gdap114545
U000076NAP003189-001Gdap1;TC882164O88741U,F,23.27482.95372.67412.76312.17682.23872.1043
0007944
(v1.0)
8012H3058B12-3Mm.18218Gdap114545
U000076NAP003189-001Gdap1;TC882164O88741U,F,23.61913.69433.3183.38692.48252.47652.4339
0007944
(v1.0)
13857J0215D10-3Mm.18218Gdap114545
U000076NAP003189-001Gdap1;TC882164O88741U,F,23.84663.75933.32743.59343.00282.79312.8048
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007944
(v1.0)
1423328_atMm.18218Gdap1NM_010267.314545
1555.2752135.9252631.2158.50
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007944
(v1.0)
A_51_P462391Gdap1NM_01026714545
11P0.5150.0951P
0007944
(v1.0)
A_52_P196685Gdap1NM_01026714545
11P0.3480.0605P
Proteome N/A