DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007948
GeneGde1
SynonymsMir16
Desc.glycerophosphodiester phosphodiesterase 1
LocusNM_019580 chr7:125832072-125849252(-)
DB links


Entrez 56209
MGI 1891827
Ensembl ENSMUSG00000033917
Vega OTTMUSG00000023306
Featureprotein-coding
GO(BP)
GO(MF)
  •   5 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007879
(v2.0)
Gde1NM_01958056209
123.01821.896319.5853105.47168.60431.789521.589821.608673.728733.0706
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007948
(v1.0)
Gde156209
2-Cell Transient0.97852
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007879
(v2.0)
Gde156209
650/4040.1729450/4040.0393127/4041.9002295/4040.873655/404-0.8079386/404-0.663
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007879
(v2.0)
Gde156209
357/1530.7059223/1530.4249114/1533.0791271/1532.137813/153-1.43186/153-1.4147
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007879
(v2.0)
Gde156209
68.006913550.38
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007879
(v2.0)
Gde156209
14.95817819.18
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007948
(v1.0)
Gde1NM_01958056209
22.763113.5978.543647.644115.3686
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007948
(v1.0)
Gde1NM_01958056209
28.178415.262591.333956.305218.5562
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007948
(v1.0)
Gde1NM_01958056209
23.800944.988814.827
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007948
(v1.0)
Gde1NM_01958056209
23.23213.453516.0095
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007948
(v1.0)
Gde1NM_01958056209
15.497318.75
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007948
(v1.0)
Gde1NM_01958056209
23.814744.372617.5587
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007948
(v1.0)
Gde1NM_01958056209
72.719146.002350.9307
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007948
(v1.0)
Gde1NM_01958056209
55.695961.1048
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007948
(v1.0)
Gde1NM_01958056209
6.7359161.7421
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007948
(v1.0)
Gde1NM_01958056209
28.333513.6827
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007948
(v1.0)
14939J0914B09-3Mm.30126Mir16-pending56209
U029174NAP008772-001Mir16;TC853158Q9JL56U,F,23.8473.75883.98184.59074.014.15313.9589
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007948
(v1.0)
1418444_a_atMm.273142Gde1NM_019580.456209
00373.225296.825203.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007948
(v1.0)
A_51_P294515MGI:1891827NM_01958056209
11P0.9480.692P
Proteome N/A