DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007958
GeneGdf9
SynonymsGdf-9
Desc.growth differentiation factor 9
LocusNM_008110 chr11:53246788-53251404(+)
DB links


Entrez 14566
MGI 95692
Ensembl ENSMUSG00000018238
Vega OTTMUSG00000000055
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007889
(v2.0)
Gdf9NM_00811014566
4.73342233.75299.04179.606439.51760.2083160.34476310.69594.84860.163114
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007958
(v1.0)
Gdf914566
Maternal RNA0.99909
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007889
(v2.0)
Gdf914566
648/505-0.1528449/505-0.2851495/5053.54091166/5052.532671/505-0.7643597/505-0.3571
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007889
(v2.0)
Gdf914566
241/184-0.1228179/184-0.1551130/1843.0188388/1842.391843/184-0.0386202/184-0.4617
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007889
(v2.0)
Gdf914566
86.411117748.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007889
(v2.0)
Gdf914566
27.56654167.24
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007958
(v1.0)
Gdf9NM_00811014566
2322.69207.26459.294727.42240.241364
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007958
(v1.0)
Gdf9NM_00811014566
2820.94240.13267.651431.69410.416155
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007958
(v1.0)
Gdf9NM_00811014566
2428.591.73105226.129
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007958
(v1.0)
Gdf9NM_00811014566
2370.54205.183230.19
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007958
(v1.0)
Gdf9NM_00811014566
292.528346.747
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007958
(v1.0)
Gdf9NM_00811014566
24301.70734252.464
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007958
(v1.0)
Gdf9NM_00811014566
54.897726.477466.7598
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007958
(v1.0)
Gdf9NM_00811014566
31.211578.5454
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007958
(v1.0)
Gdf9NM_00811014566
1079.8513.7983
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007958
(v1.0)
Gdf9NM_00811014566
2354.583287.73
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0007958
(v1.0)
7931H3056F01-3Mm.9714Gdf914566
U012594NAP012200-001Gdf9;TC825185,TC825183Q07105U,F,24.36034.98494.18313.97683.52853.35713.0456
0007958
(v1.0)
14402J0460C07-3Mm.9714Gdf914566
U012594NAP012200-001Gdf9;TC825185,TC825183Q07105U,F,24.22184.86154.24053.92493.47243.26182.9498
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007958
(v1.0)
1448120_atMm.482654Gdf914566
7590.159208.351447.55176.92567.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0007958
(v1.0)
A_51_P220806Gdf9NM_00811014566
11P0.8490.347P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0007958
(v1.0)
Gdf914566
101911275715