DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0007999
GeneGgnbp2
SynonymsDIF-3
Zfp403
Desc.gametogenetin binding protein 2
LocusNM_153144 chr11:84645863-84684240(-)
DB links


Entrez 217039
MGI 2387356
Ensembl ENSMUSG00000020530
Vega OTTMUSG00000001025
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2007933
(v2.0)
Ggnbp2NM_153144217039
27.11823.624274.3814813.211412.795321.495930.89872.4842613.752320.3328
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0007999
(v1.0)
Ggnbp2217039
Major ZGA0.99412
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007933
(v2.0)
Ggnbp2217039
724/3050.7325537/3050.6981681/3054.70571812/3053.890913/305-2.407182/305-2.4728
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2007933
(v2.0)
Ggnbp2217039
426/1461.027284/1460.8394652/1465.6471558/1464.72328/146-2.002759/146-1.8798
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007933
(v2.0)
Ggnbp2217039
31.526511427.65
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2007933
(v2.0)
Ggnbp2217039
7.037878.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007999
(v1.0)
Ggnbp2NM_153144217039
3.767993.029179.838098.8881421.6818
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0007999
(v1.0)
Ggnbp2FR225992,NM_153144217039
51.223767.405284.450842.7534103.54
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0007999
(v1.0)
Ggnbp2NM_153144217039
3.939779.917383.30489
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0007999
(v1.0)
Ggnbp2NM_153144217039
3.845612.998761.83941
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0007999
(v1.0)
Ggnbp2FR225992,NM_153144217039
3.568582.27839
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0007999
(v1.0)
Ggnbp2NM_153144217039
3.942069.781552.0174
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0007999
(v1.0)
Ggnbp2NM_153144217039
9.108548.581869.53336
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0007999
(v1.0)
Ggnbp2FR225992,NM_153144217039
61.4313174.833
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0007999
(v1.0)
Ggnbp2NM_153144217039
2.722218.623
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0007999
(v1.0)
Ggnbp2NM_153144217039
3.467673.06724
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0007999
(v1.0)
1426011_a_atMm.356653Ggnbp2NM_153144.2217039
00146.425106.825196.45
0007999
(v1.0)
1440929_atMm.356653Ggnbp2NM_153144.2217039
72.4581.125000
Agilent44K N/A
Proteome N/A