DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009068
GeneGm561
SynonymsLOC228715
Desc.predicted gene 561
LocusNM_001033297 chr2:144419801-144421101(+)
DB links


Entrez 228715
MGI 2685407
Ensembl ENSMUSG00000074754
Vega OTTMUSG00000003920
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2008960
(v2.0)
Gm561NM_001033297228715
35.39626.7107412.770819.583925.895316.85294.5212212.937528.848522.3977
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009068
(v1.0)
Gm561228715
MGA0.94106
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2008960
(v2.0)
Gm561228715
561/452-0.2007437/452-0.164539/4520.0646135/452-0.409495/452-0.1907461/452-0.5694
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2008960
(v2.0)
Gm561228715
245/195-0.1825178/195-0.246435/1951.0766124/1950.671262/1950.3973284/195-0.0566
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2008960
(v2.0)
Gm561228715
67.524911459.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2008960
(v2.0)
Gm561228715
23.59716735.22
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009068
(v1.0)
Gm561NM_001033297228715
6.97178.8056414.601418.09853.27473
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009068
(v1.0)
Gm561NM_001033297228715
8.646549.4900216.478221.11033.84253
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009068
(v1.0)
Gm561NM_001033297228715
7.2895512.94479.60715
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009068
(v1.0)
Gm561NM_001033297228715
7.115328.717239.62189
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009068
(v1.0)
Gm561NM_001033297228715
9.6382710.7877
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009068
(v1.0)
Gm561NM_001033297228715
7.2937812.767510.553
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009068
(v1.0)
Gm561NM_001033297228715
13.518617.474820.023
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009068
(v1.0)
Gm561NM_001033297228715
20.880424.8257
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009068
(v1.0)
Gm561NM_001033297228715
4.4573269.8559
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009068
(v1.0)
Gm561NM_001033297228715
18.3643.5771
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009068
(v1.0)
1454921_atMm.27391Gm561NM_001033297.2228715
203.6218.55232.725260.125275.375
Agilent44K N/A
Proteome N/A