DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009349
GeneGmnn
SynonymsGem
Desc.geminin
LocusNM_020567 chr13:24843714-24853806(-)
DB links


Entrez 57441
MGI 1927344
Ensembl ENSMUSG00000006715
Vega OTTMUSG00000000611
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009227
(v2.0)
GmnnNM_02056757441
8.6290641.9121129.697140.992186.62766.609720.8567132.848172.67884.6413
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009349
(v1.0)
Gmnn57441
MGA0.99333
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009227
(v2.0)
Gmnn57441
474/3300.0096308/330-0.215107/3301.9375254/3300.948420/330-1.9343138/330-1.8458
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009227
(v2.0)
Gmnn57441
308/218-0.0141174/218-0.4391105/2182.4827240/2181.459412/218-2.037382/218-1.9902
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009227
(v2.0)
Gmnn57441
50.497910548.09
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009227
(v2.0)
Gmnn57441
16.21626823.85
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009349
(v1.0)
GmnnNM_02056757441
43.557489.9541105.013129.53415.0782
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009349
(v1.0)
GmnnNM_02056757441
98.3003195.391275.639328.99127.1742
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009349
(v1.0)
GmnnNM_02056757441
45.54323.1557398.1418
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009349
(v1.0)
GmnnNM_02056757441
44.454789.050898.6919
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009349
(v1.0)
GmnnNM_02056757441
221.955191.503
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009349
(v1.0)
GmnnNM_02056757441
45.56973.11251108.242
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009349
(v1.0)
GmnnNM_02056757441
97.2253125.07119.707
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009349
(v1.0)
GmnnNM_02056757441
325.419361.57
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009349
(v1.0)
GmnnNM_02056757441
17.9702137.545
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009349
(v1.0)
GmnnNM_02056757441
235.728188.232
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009349
(v1.0)
17691L0007A03-3Mm.12239Gmnn57441
U034626NAP021693-001Geminin;Gmnn;TC821975,TC815396,TC815394O88513U,F,24.52254.77484.22114.48194.30754.34594.3985
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009349
(v1.0)
1417506_atMm.12239GmnnNM_020567.257441
994.152312.2752687.81963.551745.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009349
(v1.0)
A_51_P166155GmnnNM_02056757441
11P0.960.753P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009349
(v1.0)
Gmnn57441
010010