DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009371
GeneGnb1
Synonyms
Desc.guanine nucleotide binding protein (G protein), beta 1
LocusNM_008142 chr4:154865470-154933378(+)
NM_001160017 chr4:154865470-154933378(+)
NM_001160016 chr4:154865470-154933378(+)
DB links


Entrez 14688
MGI 95781
Ensembl ENSMUSG00000029064
Vega OTTMUSG00000010708
Featureprotein-coding
GO(BP)
  •   11 Terms
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009249
(v2.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
102.24529.096984.66545.207533.810783.511880.259987.015830.56781.6871
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009371
(v1.0)
Gnb114688
Minor ZGA0.9454
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009249
(v2.0)
Gnb114688
781/4720.2133421/472-0.2805171/4722.1081373/4720.98798/472-3.6676165/472-2.1055
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009249
(v2.0)
Gnb114688
440/1840.7418224/1840.1667147/1843.1948328/1842.15013/184-3.498175/184-1.8731
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009249
(v2.0)
Gnb114688
67.098513250.83
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009249
(v2.0)
Gnb114688
14.25717618.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
30.256858.728433.668623.465357.0422
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
58.621792.2565618.04871.6885104.006
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
31.636337.39264.074
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
30.880258.138764.459
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
103.291190.704
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
31.654736.879970.6965
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
31.171822.656621.1845
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
71.850353.887
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
19.837828.4603
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009371
(v1.0)
Gnb1NM_001160016,NM_001160017,NM_00814214688
31.953434.5851
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009371
(v1.0)
345C0102D07-3Mm.2344Gnb114688
U042607NAP012249-001Gnb1;TC919578,TC919577,TC919574Q61621U,F,23.66843.66753.38933.3553.37213.55713.6596
0009371
(v1.0)
10333H3094D02-3Mm.200776Gnb114688
U042607NAP107869-1Gnb1;TC836832Q61621U,F,22.94353.06252.7752.50622.41432.69832.6552
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009371
(v1.0)
1417432_a_atMm.2344Gnb1NM_008142.4,NM_001160016.1,NM_001160017.114688
85.3228.475308.7379.65613.95
0009371
(v1.0)
1454696_atMm.2344Gnb1NM_008142.4,NM_001160016.1,NM_001160017.114688
183.025245.9227.75128.525417.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009371
(v1.0)
A_51_P335081Gnb1NM_00814214688
11P1.0760.597P
0009371
(v1.0)
A_52_P205991Gnb1NM_00814214688
11P0.6350.18P
0009371
(v1.0)
A_52_P470505Gnb1NM_00814214688
11P0.7070.196P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009371
(v1.0)
Gnb114688
53110172