DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009393
GeneGnl3
SynonymsNS
nucleostemin
Desc.guanine nucleotide binding protein-like 3 (nucleolar)
LocusNM_153547 chr14:31825619-31832275(-)
DB links


Entrez 30877
MGI 1353651
Ensembl ENSMUSG00000042354
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009271
(v2.0)
Gnl3NM_153547,NR_10429830877
32.929149.786536.0408159.566231.386205.16770.003233.3841193.315245.024
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009393
(v1.0)
Gnl330877
Major ZGA0.98409
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009271
(v2.0)
Gnl330877
631/4100.1089455/4100.034318/4103.1969886/4102.43585/410-4.051366/410-3.2052
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009271
(v2.0)
Gnl330877
286/1640.2879192/1640.1106310/1644.4213836/1643.66082/164-3.75136/164-2.7363
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009271
(v2.0)
Gnl330877
56.934812047.45
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009271
(v2.0)
Gnl330877
21.5658325.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009393
(v1.0)
Gnl3NM_15354730877
52.957225.5545121.476163.99850.987
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009393
(v1.0)
Gnl3FR025682,FR258307,NM_15354730877
7485.144461343829.14686296755.7
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009393
(v1.0)
Gnl3NM_15354730877
55.371612.278427.8806
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009393
(v1.0)
Gnl3NM_15354730877
54.048225.29825.3017
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009393
(v1.0)
Gnl3FR258307,NM_15354730877
29796.852406
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009393
(v1.0)
Gnl3NM_15354730877
55.403812.110227.7501
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009393
(v1.0)
Gnl3NM_15354730877
112.468158.347136.671
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009393
(v1.0)
Gnl3FR258307,NM_15354730877
23214.622219
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009393
(v1.0)
Gnl3NM_15354730877
39.6885115.355
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009393
(v1.0)
Gnl3NM_15354730877
4.545156.16812
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009393
(v1.0)
1433656_a_atMm.88512Gnl3NM_153547.530877
873.925300.3751248.8251955.751022.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009393
(v1.0)
A_51_P377376Gnl3NM_17884630877
11P1.0920.639P
Proteome N/A