DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009398
GeneGnpda2
SynonymsGnp2
Desc.glucosamine-6-phosphate deaminase 2
LocusNM_001038015 chr5:69966241-69983524(-)
DB links


Entrez 67980
MGI 1915230
Ensembl ENSMUSG00000029209
Vega OTTMUSG00000027748
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
GO(CC)
KEGG
  •   2 Terms
      Amino sugar and nucleotide sugar metabolism (mmu00520)
      Metabolic pathways (mmu01100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009276
(v2.0)
Gnpda2NM_00103801567980
6.891527.937950.04114.694215.594712.15610.107330.71776.3776510.4247
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009398
(v1.0)
Gnpda267980
Minor ZGA0.99105
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009276
(v2.0)
Gnpda267980
649/3800.2588474/3800.2022101/3801.6583489/3801.6885158/3800.7851775/3800.4279
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009276
(v2.0)
Gnpda267980
257/1330.4347202/1330.483678/1332.7236190/1331.826441/1330.3504208/1330.0455
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009276
(v2.0)
Gnpda267980
60.814110359.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009276
(v2.0)
Gnpda267980
14.07175426.06
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009398
(v1.0)
Gnpda2NM_00103801567980
29.025634.46073.489113.897697.10447
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009398
(v1.0)
Gnpda2NM_00103801567980
36.733939.73034.177164.734828.47312
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009398
(v1.0)
Gnpda2NM_00103801567980
30.34892.5202937.5974
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009398
(v1.0)
Gnpda2NM_00103801567980
29.623534.114722.7029
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009398
(v1.0)
Gnpda2NM_00103801567980
40.352627.7933
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009398
(v1.0)
Gnpda2NM_00103801567980
30.36652.4857724.8997
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009398
(v1.0)
Gnpda2NM_00103801567980
3.230373.763374.43736
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009398
(v1.0)
Gnpda2NM_00103801567980
4.683465.81122
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009398
(v1.0)
Gnpda2NM_00103801567980
8.9307419.1687
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009398
(v1.0)
Gnpda2NM_00103801567980
60.172672.3669
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009398
(v1.0)
11437H3115E03-3Mm.338304921523I18Rik67980
4921523I18Rik3.40433.12572.62012.41142.38392.44672.3142
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009398
(v1.0)
1426523_a_atMm.33830Gnpda2NM_001038015.167980
506.3522.475189.12526.27533.75
0009398
(v1.0)
1457230_atMm.33830Gnpda2NM_001038015.167980
217.05275.35000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009398
(v1.0)
A_52_P434820Gnpda2NM_02768167980
11P0.3740.119P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009398
(v1.0)
Gnpda267980
20161716382102