DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009409
GeneGolga5
SynonymsRet-II
Desc.golgi autoantigen, golgin subfamily a, 5
LocusNM_001199004 chr12:103707344-103736117(+)
NM_013747 chr12:103708120-103736117(+)
DB links


Entrez 27277
MGI 1351475
Ensembl ENSMUSG00000021192
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009287
(v2.0)
Golga5NM_001199004,NM_01374727277
15.749378.3699168.21534.643915.08167.7760613.5759141.51720.21788.7571
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009409
(v1.0)
Golga527277
Minor ZGA0.99608
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009287
(v2.0)
Golga527277
650/3330.4509473/3330.3891336/3333.5667911/3332.773950/333-0.6671302/333-0.7374
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009287
(v2.0)
Golga527277
346/1470.7183240/1470.5877317/1474.5998841/1473.824818/147-0.934395/147-1.2161
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009287
(v2.0)
Golga527277
51.14228262.37
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009287
(v2.0)
Golga527277
10.77044026.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
81.4432116.59625.809610.46639.55947
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
101.138131.08230.117712.619711.6612
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
85.15635.76013127.208
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
83.121115.425104.795
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
133.102122.981
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
85.20585.68124114.936
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
23.895710.105614.0012
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
12.483216.8975
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
39.350419.5037
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009409
(v1.0)
Golga5NM_001199004,NM_01374727277
26.242626.9718
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009409
(v1.0)
1418447_atMm.273370Golga5NM_001199004.1,NM_013747.427277
513.15554.325594.5155.525323.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009409
(v1.0)
A_51_P211903Golga5NM_01374727277
11P1.0760.596P
0009409
(v1.0)
A_52_P670037Golga5NM_01374727277
11P1.1990.32P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009409
(v1.0)
Golga527277
130140