DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009448
GeneGpbp1
Synonyms
Desc.GC-rich promoter binding protein 1
LocusNM_028487 chr13:112215888-112280249(-)
NM_001122963 chr13:112215888-112280249(-)
DB links


Entrez 73274
MGI 1920524
Ensembl ENSMUSG00000032745
Vega OTTMUSG00000019752
Featureprotein-coding
GO(BP)
  •   3 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009328
(v2.0)
Gpbp1NM_001122963,NM_02848773274
16.3769209.337410.466519.144219.37646.075638.242250.923210.61241.7483
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009448
(v1.0)
Gpbp173274
2-Cell Transient0.92463
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009328
(v2.0)
Gpbp173274
720/2950.7724486/2950.6024246/2953.2867721/2952.6103112/2950.6532633/2950.5007
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009328
(v2.0)
Gpbp173274
459/961.7341249/961.2502226/964.6709523/963.742433/960.499223/960.6114
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009328
(v2.0)
Gpbp173274
59.252716935.06
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009328
(v2.0)
Gpbp173274
13.845812011.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009448
(v1.0)
Gpbp1NM_001122963,NM_02848773274
217.518282.978386.557151.87426.9404
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009448
(v1.0)
Gpbp1FR146700,FR265013,FR382179,NM_001122963,NM_02848773274
250.517295.59433.861197.68341.2979
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009448
(v1.0)
Gpbp1NM_001122963,NM_02848773274
227.4355.98962308.735
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009448
(v1.0)
Gpbp1NM_001122963,NM_02848773274
221.999280.136185.528
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009448
(v1.0)
Gpbp1FR146700,FR265013,NM_001122963,NM_02848773274
687.072624.806
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009448
(v1.0)
Gpbp1NM_001122963,NM_02848773274
227.5675.90758203.48
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009448
(v1.0)
Gpbp1NM_001122963,NM_02848773274
357.892146.641145.579
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009448
(v1.0)
Gpbp1FR146700,FR265013,FR382179,NM_001122963,NM_02848773274
284.527251.94
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009448
(v1.0)
Gpbp1NM_001122963,NM_02848773274
166.918317.344
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009448
(v1.0)
Gpbp1NM_001122963,NM_02848773274
38.995166.7569
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009448
(v1.0)
9989H3089A09-31700034P14Rik73274
U035169NAP016267-0011700034P14Rik;TC903567Q9CVT5U,F,23.33433.30213.5313.75032.92482.78842.7782
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009448
(v1.0)
1423773_atMm.57286Gpbp1NM_028487.4,NM_001122963.173274
2690.952506.1256358.451373.9810.5
0009448
(v1.0)
1430981_s_atMm.57286Gpbp1NM_028487.4,NM_001122963.173274
1013.6752450.1251870.725594.3355.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009448
(v1.0)
A_51_P122964GpbpNM_02848773274
11P0.3970.108P
0009448
(v1.0)
A_52_P240864GpbpNM_02848773274
11P0.2280.043P
0009448
(v1.0)
A_52_P536383GpbpNM_02848773274
11P1.0160.902P
Proteome N/A