DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009469
GeneGpn1
SynonymsXab1
Desc.GPN-loop GTPase 1
LocusNM_133756 chr5:31797134-31814000(+)
DB links


Entrez 74254
MGI 1921504
Ensembl ENSMUSG00000064037
Vega OTTMUSG00000028269
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009350
(v2.0)
Gpn1NM_13375674254
7.1570524.68858.8869933.090728.897721.848517.493913.538922.142132.0673
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009469
(v1.0)
Gpn174254
Major ZGA0.85767
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009350
(v2.0)
Gpn174254
614/469-0.1239462/469-0.1376126/4691.6795425/4691.1848125/4690.1489845/4690.2495
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009350
(v2.0)
Gpn174254
305/214-0.0016208/214-0.1565117/2142.6627338/2141.978137/214-0.4636225/214-0.5241
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009350
(v2.0)
Gpn174254
74.73713654.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009350
(v2.0)
Gpn174254
18.90427724.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009469
(v1.0)
Gpn1NM_13375674254
25.65586.1683924.634720.009612.4313
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009469
(v1.0)
Gpn1NM_13375674254
91.253523.6489180.85597.162943.2911
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009469
(v1.0)
Gpn1NM_13375674254
26.82552.617416.72985
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009469
(v1.0)
Gpn1NM_13375674254
26.18436.1064510.0451
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009469
(v1.0)
Gpn1NM_13375674254
133.315160.203
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009469
(v1.0)
Gpn1NM_13375674254
26.84112.5815611.0171
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009469
(v1.0)
Gpn1NM_13375674254
22.807919.320115.2781
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009469
(v1.0)
Gpn1NM_13375674254
169.835117.175
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009469
(v1.0)
Gpn1NM_13375674254
4.4299111.713
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009469
(v1.0)
Gpn1NM_13375674254
0.4456410.262787
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009469
(v1.0)
6462H3025E05-3Mm.187982410004J02Rik74254
U005445NAP097250-0012410004J02Rik;TC9205462.90213.07473.51963.65152.99763.26163.3103
0009469
(v1.0)
17420K0617D08-3Mm.187982410004J02Rik74254
U005445NAP033315-12410004J02Rik;TC9205481.83162.08031.99132.19081.97332.05922.1718
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009469
(v1.0)
1417390_atMm.348649Gpn1NM_133756.474254
970.9250885.9536.725618.175
Agilent44K N/A
Proteome N/A