DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009717
GeneGtf2a2
Synonyms12kDa
Tfiia2
TfIIg
Desc.general transcription factor II A, 2
LocusNM_001039519 chr9:69860357-69870654(+)
DB links


Entrez 235459
MGI 1933289
Ensembl ENSMUSG00000033543
Vega OTTMUSG00000030858
Featureprotein-coding
GO(BP)
  •   7 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      transcription from RNA polymerase II promoter (GO:0006366)
      transcription initiation from RNA polymerase II promoter (GO:0006367)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of sequence-specific DNA binding transcription factor activity (GO:0051091)
      RNA polymerase II transcriptional preinitiation complex assembly (GO:0051123)
GO(MF)
  •   6 Terms
GO(CC)
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009596
(v2.0)
Gtf2a2NM_001039519,NM_001282083,NM_001282084,NR_104093235459
18.865230.625257.055651.921227.280825.670534.395939.193323.242834.4046
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009717
(v1.0)
Gtf2a2235459
Minor ZGA0.98083
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009596
(v2.0)
Gtf2a2235459
732/3730.4588595/3730.5563603/3734.25031890/3733.66357/373-3.501386/373-2.6948
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009596
(v2.0)
Gtf2a2235459
403/1710.7207336/1710.8545586/1715.28151760/1714.67452/171-3.809857/171-2.1549
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009596
(v2.0)
Gtf2a2235459
55.570311647.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009596
(v2.0)
Gtf2a2235459
15.66367321.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009717
(v1.0)
Gtf2a2NM_001039519235459
32.813940.52539.833619.512924.9906
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009717
(v1.0)
Gtf2a2NM_001039519235459
37.323842.987746.11235.079435.3331
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009717
(v1.0)
Gtf2a2NM_001039519235459
34.30996.5734544.2137
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009717
(v1.0)
Gtf2a2NM_001039519235459
33.489940.118129.9303
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009717
(v1.0)
Gtf2a2NM_001039519235459
45.793629.8015
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009717
(v1.0)
Gtf2a2NM_001039519235459
34.32996.4834232.8265
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009717
(v1.0)
Gtf2a2NM_001039519235459
36.879718.840516.4121
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009717
(v1.0)
Gtf2a2NM_001039519235459
20.33118.2712
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009717
(v1.0)
Gtf2a2NM_001039519235459
40.963839.2316
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009717
(v1.0)
Gtf2a2NM_001039519235459
127.833153.956
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009717
(v1.0)
12726H3151B04-3Mm.34772235459
U010699NAP015444-001TC825802,TC825792U,F,23.62663.64543.21413.12293.03293.02953.1125
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009717
(v1.0)
1433528_atMm.293117Gtf2a2NM_001039519.1235459
892.651398.05886.325340.625914.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009717
(v1.0)
A_51_P320377Gtf2a2NM_199151235459
11P1.7410.124P
0009717
(v1.0)
A_51_P454726Gtf2a2NM_199151235459
11P0.6350.138P
0009717
(v1.0)
A_52_P189897Gtf2a2NM_199151235459
11P1.0150.903P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009717
(v1.0)
Gtf2a2235459
010010