DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009718
GeneGtf2b
Synonyms
Desc.general transcription factor IIB
LocusNM_145546 chr3:142428211-142446569(+)
DB links


Entrez 229906
MGI 2385191
Ensembl ENSMUSG00000028271
Featureprotein-coding
GO(BP)
  •   3 Terms
      transcription, DNA-dependent (GO:0006351)
      DNA-dependent transcription, initiation (GO:0006352)
      regulation of transcription, DNA-dependent (GO:0006355)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009597
(v2.0)
Gtf2bNM_145546229906
23.7605480.798443.11443.197944.485827.163535.7479259.03872.269329.2971
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009718
(v1.0)
Gtf2b229906
Maternal RNA0.99561
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009597
(v2.0)
Gtf2b229906
713/4090.2883532/4090.2625426/4093.6211517/4093.214444/409-1.1409291/409-1.0865
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009597
(v2.0)
Gtf2b229906
362/1940.3854235/1940.1596344/1944.34411175/1943.91257/194-2.5728122/194-1.2581
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009597
(v2.0)
Gtf2b229906
71.295314050.93
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009597
(v2.0)
Gtf2b229906
28.44658931.96
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009718
(v1.0)
Gtf2bNM_145546229906
499.569307.3432.173530.97125.275
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009718
(v1.0)
Gtf2bNM_145546229906
525.069297.40830.419729.578425.9338
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009718
(v1.0)
Gtf2bNM_145546229906
522.3458.68946335.314
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009718
(v1.0)
Gtf2bNM_145546229906
509.861304.254192.003
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009718
(v1.0)
Gtf2bNM_145546229906
352.678350.98
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009718
(v1.0)
Gtf2bNM_145546229906
522.6498.57044210.583
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009718
(v1.0)
Gtf2bNM_145546229906
29.787629.903849.8573
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009718
(v1.0)
Gtf2bNM_145546229906
29.257850.0581
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009718
(v1.0)
Gtf2bNM_145546229906
354.97714.4839
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009718
(v1.0)
Gtf2bNM_145546229906
388.035290.389
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009718
(v1.0)
17978L0042A01-3Mm.27213LOC229906229906
U003927NAP098288-001TC925317,TC925313U,F,23.693.60243.06742.99342.71252.95852.8253
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009718
(v1.0)
1451135_atMm.271756Gtf2bNM_145546.1229906
3279.6754377.275651.4421.425624.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009718
(v1.0)
A_51_P502054Gtf2bNM_145546229906
11P0.9840.9P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009718
(v1.0)
Gtf2b229906
011011