DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009731
GeneGtf3a
Synonyms
Desc.general transcription factor III A
LocusNM_025652 chr5:147760233-147767190(+)
DB links


Entrez 66596
MGI 1913846
Ensembl ENSMUSG00000016503
Vega OTTMUSG00000024608
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009610
(v2.0)
Gtf3aNM_02565266596
25.312223.289619.816138.701331.453836.723233.349930.257645.364840.8173
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009731
(v1.0)
Gtf3a66596
2-Cell Transient0.96004
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009610
(v2.0)
Gtf3a66596
749/5070.0501424/507-0.373347/5070.1661212/5070.07351/507-1.2394417/507-0.8789
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009610
(v2.0)
Gtf3a66596
330/2030.1873170/203-0.370145/2031.3755153/2030.91521/203-1.1774135/203-1.1789
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009610
(v2.0)
Gtf3a66596
111.538916069.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009610
(v2.0)
Gtf3a66596
22.14466733.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009731
(v1.0)
Gtf3aNM_02565266596
24.217813.787128.844321.836523.7934
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009731
(v1.0)
Gtf3aNM_02565266596
34.669913.4701142.62875.8124106.213
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009731
(v1.0)
Gtf3aNM_02565266596
25.3229.2569115.042
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009731
(v1.0)
Gtf3aNM_02565266596
24.716813.648722.4094
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009731
(v1.0)
Gtf3aNM_02565266596
62.607185.5529
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009731
(v1.0)
Gtf3aNM_02565266596
25.33679.1301224.5779
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009731
(v1.0)
Gtf3aNM_02565266596
26.705321.08431.475
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009731
(v1.0)
Gtf3aNM_02565266596
135.115501.23
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009731
(v1.0)
Gtf3aNM_02565266596
13.228514.1578
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009731
(v1.0)
Gtf3aNM_02565266596
36.50535.81837
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009731
(v1.0)
5984H3014C11-3Mm.29105Gtf3a66596
U006441NAP097680-001Gtf3a;TC864266Q9CSH83.05763.38053.32683.45983.01483.17813.1512
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009731
(v1.0)
1427027_a_atMm.358698Gtf3aNM_025652.366596
282.275293.5247.375122.4243.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009731
(v1.0)
A_51_P307644Gtf3aNM_02565266596
11P1.3980.185P
Proteome N/A