DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009737
GeneGtf3c6
Synonyms
Desc.general transcription factor IIIC, polypeptide 6, alpha
LocusNM_026113 chr10:39969009-39977471(-)
DB links


Entrez 67371
MGI 1914621
Ensembl ENSMUSG00000019837
Featureprotein-coding
GO(BP)
  •   2 Terms
      transcription, DNA-dependent (GO:0006351)
      transcription from RNA polymerase III promoter (GO:0006383)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009616
(v2.0)
Gtf3c6NM_02611367371
20.74293.579754.4947312.255110.321314.45988.583737.4930911.48519.4568
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009737
(v1.0)
Gtf3c667371
Major ZGA0.99149
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009616
(v2.0)
Gtf3c667371
519/387-0.0892329/387-0.349490/3871.4681271/3870.813239/387-1.2319219/387-1.4145
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009616
(v2.0)
Gtf3c667371
239/179-0.0952134/179-0.530382/1792.3977255/1791.82737/179-2.459234/179-2.9408
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009616
(v2.0)
Gtf3c667371
63.124713646.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009616
(v2.0)
Gtf3c667371
12.7558215.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009737
(v1.0)
Gtf3c6NM_02611367371
3.717443.126229.118257.152155.97406
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009737
(v1.0)
Gtf3c6NM_02611367371
74.36159.2555661.356810.0772196.154
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009737
(v1.0)
Gtf3c6NM_02611367371
3.886927.585883.41077
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009737
(v1.0)
Gtf3c6NM_02611367371
3.794023.094835.52917
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009737
(v1.0)
Gtf3c6NM_02611367371
9.2626516.3151
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009737
(v1.0)
Gtf3c6NM_02611367371
3.889187.481986.06421
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009737
(v1.0)
Gtf3c6NM_02611367371
8.442086.905697.88778
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009737
(v1.0)
Gtf3c6NM_02611367371
17.778798.3959
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009737
(v1.0)
Gtf3c6NM_02611367371
15.920153.4131
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009737
(v1.0)
Gtf3c6NM_02611367371
1.536680.198221
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009737
(v1.0)
6672H3031A04-3Mm.641042410016F19Rik67371
U031711NAP035779-12410016F19Rik;Q9D8P7U,F,22.2952.52332.39332.48022.40842.50632.5341
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009737
(v1.0)
1447266_atMm.485831Gtf3c6NM_026113.467371
0031.12500
Agilent44K N/A
Proteome N/A