DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009780
GeneGzf1
SynonymsZfp336
Desc.GDNF-inducible zinc finger protein 1
LocusNM_028986 chr2:148506856-148518685(+)
DB links


Entrez 74533
MGI 1921783
Ensembl ENSMUSG00000027439
Vega OTTMUSG00000015714
Featureprotein-coding
GO(BP)
  •   5 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      branching involved in ureteric bud morphogenesis (GO:0001658)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      negative regulation of transcription, DNA-dependent (GO:0045892)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009658
(v2.0)
Gzf1NM_02898674533
8.7503134.38856.206417.80926.4560110.045814.29756.51559.9397612.0176
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009780
(v1.0)
Gzf174533
Minor ZGA0.98828
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009658
(v2.0)
Gzf174533
847/5170.199546/517-0.0374511/5173.55361792/5173.118421/517-2.5084166/517-2.228
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009658
(v2.0)
Gzf174533
317/2040.1225201/204-0.1369301/2044.0837915/2043.48047/204-2.643880/204-1.9298
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009658
(v2.0)
Gzf174533
50.322814534.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009658
(v2.0)
Gzf174533
9.99057213.88
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009780
(v1.0)
Gzf1NM_02898674533
35.73739.010613.26544.50029.95955
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009780
(v1.0)
Gzf1NM_02898674533
42.844742.277514.83365.1759811.4415
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009780
(v1.0)
Gzf1NM_02898674533
37.36633.2000842.5614
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009780
(v1.0)
Gzf1NM_02898674533
36.473238.618941.8592
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009780
(v1.0)
Gzf1NM_02898674533
88.580483.5045
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009780
(v1.0)
Gzf1NM_02898674533
37.3883.1562545.9097
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009780
(v1.0)
Gzf1NM_02898674533
12.28174.345136.8765
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009780
(v1.0)
Gzf1NM_02898674533
5.119778.07746
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009780
(v1.0)
Gzf1NM_02898674533
15.42739.18993
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009780
(v1.0)
Gzf1NM_02898674533
19.595218.4353
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009780
(v1.0)
21964L0929C08-3Mm.1369138430437G08Rik74533
U002601NAP095961-0018430437G08Rik;TC864548,TC864547Q9CX96U,F,23.47063.2022.96512.78762.58392.56682.4464
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009780
(v1.0)
1428348_atMm.136913Gzf1NM_028986.374533
1190.7751673.975633.45179.875428.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009780
(v1.0)
A_51_P491095Zfp336NM_02898674533
11P0.1490.0335P
0009780
(v1.0)
A_52_P131624Zfp336NM_02898674533
11P0.4580.103P
Proteome N/A