DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009791
GeneH13
SynonymsH-13
Spp
Desc.histocompatibility 13
LocusNM_010376 chr2:152495197-152534404(+)
NM_001159553 chr2:152495197-152510882(+)
NM_001159552 chr2:152495197-152512443(+)
NM_001159551 chr2:152495197-152534404(+)
DB links


Entrez 14950
MGI 95886
Ensembl ENSMUSG00000019188
Vega OTTMUSG00000015824
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009669
(v2.0)
H13NM_001159551,NM_001159552,NM_001159553,NM_01037614950
22.96932.751636.56568.808111.18494.6980117.971772.790612.37574.81007
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009791
(v1.0)
H1314950
Maternal RNA0.95986
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009669
(v2.0)
H1314950
647/462-0.0269422/462-0.2463194/4622.3192455/4621.304690/462-0.2991537/462-0.3814
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009669
(v2.0)
H1314950
341/1940.2995214/1940.0252177/1943.3894416/1942.416738/194-0.2874177/194-0.7268
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009669
(v2.0)
H1314950
81.262313062.51
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009669
(v2.0)
H1314950
27.0557337.06
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009791
(v1.0)
H13NM_001159551,NM_001159552,NM_001159553,NM_01037614950
34.047325.29796.582397.7501312.7667
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009791
(v1.0)
H13FR306579,FR367650,NM_001159551,NM_001159552,NM_001159553,NM_01037614950
505.747300.27133.948862.445296.4647
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009791
(v1.0)
H13NM_001159551,NM_001159552,NM_001159553,NM_01037614950
35.59968.4000127.6006
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009791
(v1.0)
H13NM_001159551,NM_001159552,NM_001159553,NM_01037614950
34.748725.043953.9328
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009791
(v1.0)
H13FR306579,FR367650,NM_001159551,NM_001159552,NM_001159553,NM_01037614950
522.494713.882
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009791
(v1.0)
H13NM_001159551,NM_001159552,NM_001159553,NM_01037614950
35.62038.2849659.1517
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009791
(v1.0)
H13NM_001159551,NM_001159552,NM_001159553,NM_01037614950
6.094277.483068.60626
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009791
(v1.0)
H13FR306579,FR367650,NM_001159551,NM_001159552,NM_001159553,NM_01037614950
51.586549.8719
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009791
(v1.0)
H13NM_001159551,NM_001159552,NM_001159553,NM_01037614950
4.97041.57762
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009791
(v1.0)
H13NM_001159551,NM_001159552,NM_001159553,NM_01037614950
11.4028.28163
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009791
(v1.0)
11083H3108B03-3Mm.26991H1314950
U002650NAP084997-1H13;TC830898,TC830897,TC830892,TC830887,TC826771,TC826770Q9CSK9U,F,24.13253.95853.58873.87583.92413.95313.91
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009791
(v1.0)
1417287_atMm.277327H13NM_001159551.1,NM_010376.4,NM_001159553.1,NM_001159552.114950
325.15231.12596.725084.45
0009791
(v1.0)
1428855_atMm.277327H13NM_001159551.1,NM_010376.4,NM_001159553.1,NM_001159552.114950
14.3750000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009791
(v1.0)
A_51_P336998H13NM_01037614950
11P1.0550.69P
0009791
(v1.0)
A_52_P655663H13NM_01037614950
11P1.1570.387P
Proteome N/A