DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009795
GeneH1foo
SynonymsH1oo
Desc.H1 histone family, member O, oocyte-specific
LocusNM_138311 chr6:115894957-115900251(+)
DB links


Entrez 171506
MGI 2176207
Ensembl ENSMUSG00000042279
Vega OTTMUSG00000033828
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009673
(v2.0)
H1fooNM_138311171506
02748.21215.68748.217223.126300179.295108.740
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009795
(v1.0)
H1foo171506
Maternal RNA0.99966
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009673
(v2.0)
H1foo171506
749/586-0.1585419/586-0.598919/586-1.301365/586-1.8253128/586-0.1361053/5860.2458
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009673
(v2.0)
H1foo171506
321/237-0.0748176/237-0.542710/237-0.900338/237-1.287340/237-0.4985401/2370.1587
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009673
(v2.0)
H1foo171506
113.641512094.7
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009673
(v2.0)
H1foo171506
51.73765495.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009795
(v1.0)
H1fooNM_138311171506
2857.36150.12835.924116.04740
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009795
(v1.0)
H1fooNM_138311171506
3669.27172.59242.00119.2940
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009795
(v1.0)
H1fooNM_138311171506
2987.630163.793
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009795
(v1.0)
H1fooNM_138311171506
2916.23148.621132.85
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009795
(v1.0)
H1fooNM_138311171506
175.224256.68
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009795
(v1.0)
H1fooNM_138311171506
2989.370145.705
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009795
(v1.0)
H1fooNM_138311171506
33.260115.494476.6114
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009795
(v1.0)
H1fooNM_138311171506
19.085395.8835
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009795
(v1.0)
H1fooNM_138311171506
768.60521.4181
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009795
(v1.0)
H1fooNM_138311171506
4896.156632.68
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009795
(v1.0)
8087H3059F06-3Mm.21899H1fo-pending171506
U007302NAP013201-001H1fo;TC794309U,F,24.25774.45794.56834.28914.01514.27494.037
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009795
(v1.0)
1416518_atMm.21899H1fooNM_138311.2171506
2076.253637.867.0500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009795
(v1.0)
A_51_P178815H1fooNM_138311171506
11P0.880.422P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009795
(v1.0)
H1foo171506
142.5163.5