DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009851
GeneH3f3b
SynonymsH3.3B
Desc.H3 histone, family 3B
LocusNM_008211 chr11:115883275-115885818(-)
DB links


Entrez 15081
MGI 1101768
Ensembl ENSMUSG00000016559
Vega OTTMUSG00000003689
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Systemic lupus erythematosus (mmu05322)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009730
(v2.0)
H3f3bNM_00821115081
254.191353.152692.229314.73707.432771.713199.271535.618657.621858.826
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009851
(v1.0)
H3f3b15081
1-Cell Transient0.97071
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009730
(v2.0)
H3f3b15081
570/3260.2925422/3260.2555262/3263.2385810/3262.63531/326-1.3092193/326-1.3488
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009730
(v2.0)
H3f3b15081
263/1310.4895212/1310.5747245/1314.3824646/1313.6085/131-2.435843/131-2.1675
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009730
(v2.0)
H3f3b15081
43.929811338.88
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009730
(v2.0)
H3f3b15081
14.33667818.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009851
(v1.0)
H3f3bNM_00821115081
367.007479.029234.355491.269141.63
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009851
(v1.0)
H3f3bFR315752,FR379440,NM_00821115081
360.714531.648268.092476.983112.846
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009851
(v1.0)
H3f3bNM_00821115081
383.73992.9603522.631
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009851
(v1.0)
H3f3bNM_00821115081
374.567474.219396.665
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009851
(v1.0)
H3f3bFR315752,FR379440,NM_00821115081
539.787417.27
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009851
(v1.0)
H3f3bNM_00821115081
383.96291.687435.049
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009851
(v1.0)
H3f3bNM_00821115081
216.976474.339455.378
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009851
(v1.0)
H3f3bFR315752,FR379440,NM_00821115081
198.907240.488
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009851
(v1.0)
H3f3bNM_00821115081
243.07797.4595
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009851
(v1.0)
H3f3bNM_00821115081
710.554814.411
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009851
(v1.0)
5947H3013D08-3Mm.18516H3f3b15081
U033638NAP001504-001TC840943,TC840940Q9D0H3U,F,24.67734.53723.97074.79734.1344.33034.3877
0009851
(v1.0)
17387K0614B01-3Mm.2147749430068D06Rik78941
U033638NAP001504-001H3f3b;TC840940Q9D0H3U,F,22.64282.89852.68323.03153.08963.08453.1908
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009851
(v1.0)
1420376_a_atMm.315189~Mm.371563H3f3a~H3f3bNM_008210.4~NM_008211.315078
15081
2066.9253860.2252478.351366.7752282.3
0009851
(v1.0)
1455725_a_atMm.315189~Mm.371563H3f3a~H3f3bNM_008210.4~NM_008211.315078
15081
3383.85692.952850.3252860.52728.2
0009851
(v1.0)
1430357_atMm.371563H3f3bNM_008211.315081
0000251.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009851
(v1.0)
A_51_P164667H3f3bNM_00821115081
11P1.0780.59P
0009851
(v1.0)
A_52_P217875H3f3bAK01143115081
11P0.9780.862P
0009851
(v1.0)
A_52_P61786H3f3bNM_00821115081
11P0.1920.0384P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009851
(v1.0)
H3f3b15081
100200