DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009905
GeneHbp1
SynonymsC86454
Desc.high mobility group box transcription factor 1
LocusNM_153198 chr12:32611320-32635400(-)
NM_177993 chr12:32614248-32635400(-)
DB links


Entrez 73389
MGI 894659
Ensembl ENSMUSG00000002996
Vega OTTMUSG00000040005
Featureprotein-coding
GO(BP)
  •   4 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      Wnt receptor signaling pathway (GO:0016055)
      positive regulation of potassium ion transport (GO:0043268)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009787
(v2.0)
Hbp1NM_153198,NM_17799373389
29.300120.183931.392469.268673.205844.827625.210125.385653.259654.1654
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009905
(v1.0)
Hbp173389
Major ZGA0.98443
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009787
(v2.0)
Hbp173389
673/3370.4838541/3370.5653697/3374.60052387/3374.145545/337-0.833246/337-1.0489
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009787
(v2.0)
Hbp173389
378/1380.9359281/1380.9048643/1385.70191950/1385.12679/138-1.771760/138-1.7754
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009787
(v2.0)
Hbp173389
40.088713629.48
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009787
(v2.0)
Hbp173389
4.83984.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
20.976921.723451.577650.766217.6109
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
25.1728.224365.055574.755636.9928
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
21.933310.715423.7007
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
21.40921.505218.8113
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
49.779362.8564
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
21.94610.568620.6316
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
47.752849.016836.7128
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
57.762741.9204
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
24.133655.3954
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009905
(v1.0)
Hbp1NM_153198,NM_17799373389
18.97712.2429
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009905
(v1.0)
7821H3054E10-3Mm.876391700058O05Rik73389
U033886NAP021556-0011700058O05Rik;TC882142U,F,22.88842.84582.75942.85482.85492.91482.9454
0009905
(v1.0)
15395K0136F09-3Mm.876391700058O05Rik73389
U033886NAP104638-11700058O05Rik;TC935881U,F,23.94063.72243.674.06484.34774.09824.2691
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009905
(v1.0)
1460367_atMm.390461Hbp1NM_177993.3,NM_153198.273389
392.925474.5724.775664.375240.05
0009905
(v1.0)
1438430_atMm.390461Hbp1NM_177993.3,NM_153198.273389
78.97594.3594.2114.775130.575
0009905
(v1.0)
1432143_a_atMm.390461Hbp1NM_177993.3,NM_153198.273389
00122.97500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009905
(v1.0)
A_51_P216605Hbp1NM_17799373389
11P1.6780.121P
0009905
(v1.0)
A_52_P39247Hbp1NM_15319873389
11P0.8950.465P
Proteome N/A