DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009911
GeneHccs
Synonyms
Desc.holocytochrome c synthetase
LocusNM_008222 chrX:165749463-165758275(-)
DB links


Entrez 15159
MGI 106911
Ensembl ENSMUSG00000031352
Vega OTTMUSG00000019596
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Porphyrin and chlorophyll metabolism (mmu00860)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009794
(v2.0)
HccsNM_00822215159
2.974664.780264.5024942.454531.062714.059825.46823.0942340.126113.2307
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009911
(v1.0)
Hccs15159
Major ZGA0.98623
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009794
(v2.0)
Hccs15159
386/2100.3639321/2100.494144/2102.9857481/2102.512718/210-1.4369127/210-1.3147
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009794
(v2.0)
Hccs15159
206/950.5987156/950.5942140/953.9973427/953.46524/95-2.25243/95-1.7081
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009794
(v2.0)
Hccs15159
53.585212044.65
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009794
(v2.0)
Hccs15159
19.06918322.97
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009911
(v1.0)
HccsNM_00822215159
4.967723.1252131.613621.557818.1942
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009911
(v1.0)
HccsNM_00822215159
64.41543.9906236.756174.322185.741
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009911
(v1.0)
HccsNM_00822215159
5.194211.087863.40967
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009911
(v1.0)
HccsNM_00822215159
5.070063.093832.29046
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009911
(v1.0)
HccsNM_00822215159
61.251932.0429
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009911
(v1.0)
HccsNM_00822215159
5.197221.072962.5121
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009911
(v1.0)
HccsNM_00822215159
29.269320.814927.6589
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009911
(v1.0)
HccsNM_00822215159
185.941341.929
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009911
(v1.0)
HccsNM_00822215159
4.1991724.9652
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009911
(v1.0)
HccsNM_00822215159
0.9607320.966637
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009911
(v1.0)
1420889_atMm.284033HccsNM_008222.415159
00219.900
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009911
(v1.0)
A_51_P269524HccsNM_00822215159
11P0.80.283P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009911
(v1.0)
Hccs15159
220230