DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009912
GeneHcfc1
SynonymsHCF-1
HCF1
VP16 accessory protein
Descriptionhost cell factor C1
LocusNM_008224 UCSC: chrX:71188134-71211654(-) OLP: chrX:71188134-71211654(-)
DB links


Entrez 15161
MGI 105942
Ensembl ENSMUSG00000031386
Vega OTTMUSG00000017652
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2009795 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009912
(v1.0)
Hcfc1NM_00822415161
4.30233.553945.613786.915586.10063
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009912
(v1.0)
Hcfc1NM_00822415161
4.498454.53033.87743
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009912
(v1.0)
Hcfc1NM_00822415161
4.390943.518265.90663
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009912
(v1.0)
Hcfc1NM_00822415161
4.501074.468266.47819
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009912
(v1.0)
Hcfc1NM_00822415161
5.197496.677269.43829
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009912
(v1.0)
Hcfc1NM_00822415161
6.3461316.7229
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009912
(v1.0)
Hcfc1NM_00822415161
4.418624.93633
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009912
(v1.0)
572C0118F03-3Mm.203516AW060991103015
U039463NAP031597-1Hcfc1;TC904391,TC904389Q611913.34563.30123.36243.71793.55643.55363.6947
0009912
(v1.0)
3207C0619D04-3Mm.57203Hcfc115161
Hcfc12.51972.57932.72362.63232.42722.58392.4852
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009912
(v1.0)
1433736_atMm.485413Hcfc1NM_008224.315161
00115.525195.75133.05
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0009912
(v1.0)
A_51_P104757Hcfc1NM_00822415161
11P2.5210.0707P
Proteome N/A