DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009946
GeneHdlbp
SynonymsD1Ertd101e
Desc.high density lipoprotein (HDL) binding protein
LocusNM_133808 chr1:95302517-95375385(-)
DB links


Entrez 110611
MGI 99256
Ensembl ENSMUSG00000034088
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009829
(v2.0)
HdlbpNM_133808110611
97.4844149.174262.74578.8895131.76960.098144.695263.101144.76265.7579
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009946
(v1.0)
Hdlbp110611
Minor ZGA0.93483
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009829
(v2.0)
Hdlbp110611
592/3360.3035432/3360.2457323/3363.4974642/3362.256910/336-2.892982/336-2.612
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009829
(v2.0)
Hdlbp110611
304/1560.4472177/1560.0656318/1564.525627/1563.31744/156-2.943734/156-2.7436
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009829
(v2.0)
Hdlbp110611
29.044912423.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009829
(v2.0)
Hdlbp110611
10.802210510.29
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009946
(v1.0)
HdlbpNM_133808110611
155.053182.1258.726591.5502102.296
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009946
(v1.0)
HdlbpFR283096,NM_133808110611
568.89510.072239.534486.591378.239
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009946
(v1.0)
HdlbpNM_133808110611
162.12235.6511198.697
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009946
(v1.0)
HdlbpNM_133808110611
158.247180.291194.785
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009946
(v1.0)
HdlbpFR283096,NM_133808110611
1834.891654.49
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009946
(v1.0)
HdlbpNM_133808110611
162.21635.1628213.634
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009946
(v1.0)
HdlbpNM_133808110611
54.371688.3954100.17
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009946
(v1.0)
HdlbpFR283096,NM_133808110611
536.089615.63
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009946
(v1.0)
HdlbpNM_133808110611
73.942537.835
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009946
(v1.0)
HdlbpNM_133808110611
7.389948.00194
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009946
(v1.0)
1415987_atMm.30012HdlbpNM_133808.4110611
389.575179.55428.325353.65479.35
0009946
(v1.0)
1419869_s_atMm.30012HdlbpNM_133808.4110611
519.05247.5549.971.8164.25
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009946
(v1.0)
A_51_P416585HdlbpNM_133808110611
11P1.6980.119P
0009946
(v1.0)
A_52_P303085HdlbpNM_133808110611
11P0.7670.258P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009946
(v1.0)
Hdlbp110611
6706100