DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0009961
GeneHectd1
Synonymsopm
Desc.HECT domain containing 1
LocusNM_144788 chr12:52844709-52930523(-)
DB links


Entrez 207304
MGI 2384768
Ensembl ENSMUSG00000035247
Featureprotein-coding
GO(BP)
  •   4 Terms
      neural tube closure (GO:0001843)
      cellular protein modification process (GO:0006464)
      protein ubiquitination (GO:0016567)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2009841
(v2.0)
Hectd1NM_144788207304
17.676332.65966.3921651.653959.443610.770927.534.4960247.153610.5454
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0009961
(v1.0)
Hectd1207304
Major ZGA0.89478
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009841
(v2.0)
Hectd1207304
778/3560.6137532/3560.4622251/3563.0543574/3562.012826/356-1.6798168/356-1.6739
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2009841
(v2.0)
Hectd1207304
464/1501.1112309/1500.9219241/1504.1789536/1503.14725/150-2.625682/150-1.4538
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009841
(v2.0)
Hectd1207304
45.580116827.13
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2009841
(v2.0)
Hectd1207304
11.892911510.34
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009961
(v1.0)
Hectd1NM_144788207304
33.94624.4227138.442341.168719.2861
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0009961
(v1.0)
Hectd1FR051454,FR103632,FR291650,NM_144788207304
557.01848.3755847.406583.226280.536
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0009961
(v1.0)
Hectd1NM_144788207304
35.49396.464394.82528
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0009961
(v1.0)
Hectd1NM_144788207304
34.64554.378313.33486
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0009961
(v1.0)
Hectd1FR051454,FR103632,FR291650,NM_144788207304
31.349826.6671
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0009961
(v1.0)
Hectd1NM_144788207304
35.51456.375853.65756
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0009961
(v1.0)
Hectd1NM_144788207304
35.591639.750132.5867
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0009961
(v1.0)
Hectd1FR051454,FR103632,FR291650,NM_144788207304
669.929690.072
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0009961
(v1.0)
Hectd1NM_144788207304
23.010524.929
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0009961
(v1.0)
Hectd1NM_144788207304
10.320518.4287
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0009961
(v1.0)
6319H3023A01-3MGC12070207304
U033932NAP007709-001MGC12070;TC815196Q91Z48U,F,23.59443.28883.1883.54382.82793.06373.2435
0009961
(v1.0)
16106K0330B07-3Mm.205737MGC12070207304
U033932NAP007709-001MGC12070;TC815196Q91Z48U,F,22.91312.65352.44162.77142.77362.76992.9902
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0009961
(v1.0)
1424141_atMm.249391Hectd1NM_144788.2207304
360.625475.4279361.35538.125
0009961
(v1.0)
1438039_atMm.249391Hectd1NM_144788.2207304
877.9251024.65814.651173.652526
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0009961
(v1.0)
A_51_P416191Hectd1XM_354671207304
11P1.2050.315P
0009961
(v1.0)
A_52_P421728Hectd1XM_354671207304
11P0.2120.0559P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0009961
(v1.0)
Hectd1207304
5615121